Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1335 ATGGCAATGCTTCGTTACATTATCTTCAATTACCATCATTACAGAGCATTTATCTCCAATAACCCCCACAAATCAATCCCTCTTTTCCCATTCCAATTTTCCCACAATTTCACTACTTCCCAATCAGACTCATTCACCGTCTCTTACCTCATTAACACAATTGGTTTCCCTCGTGAAGCAGCTCTCAAAGCTTCAAAACGACTTCGTTTCAACTCTCCACAAAAACCCAATTCAGTTTTCAATTTCTTCACAAACCTAGGTTTTTCAGATTCCAATATACGCAGCATTATCATAAAACAACCACGCCTTCTTTCCTCAGATACCCACAATTCAATTCTTCCAAAGTTTCAATTTTTTCTATCCAAAGGTGCTTCATCTTCTGAAATCGCTTGTTTGTTAGCAGCGAATCCCAGAATTTTACAGAATAGTTTGGAGAATAGAATAATTCCTCTTTTTGAATTTTATAAGAGGTTTTTTAAATCTGATAAAGCTACAATTTGCTGCATCATTCGAAATTTGATATCTTTGCCTTACAATCTTACTACTGTTAATGTTAAGTTATTGATTGATTATGGAGTTTGTGATTCCGCTATTGCTAGATTGCTTTTGACAAGACCAGCTATACTTGGATCAATTGATTTCATTAGTACTTTGGAGGAAGTTAAGGGTTTAGGGTTTCACCTTTCAACTTCAACTTTTGGGGCAGCTTTGGTTGCAAAGAAATGTATGAGTAAAACACTTTGGGATGAGAAAGTTGATGTTTTTAAGAAATGGGGTTGGACTGATGAAGATGTTATTCGAGCATTTAGAGGTCGTCCTGAATTGTTGTTGACTTCAATTGATAAGATTAATTTGGTGATCAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGCACTTTCTAAAAGGCCACGTATTTTTAGTTACAGTTTGCATAAAAGGATTGTTCCAAGGGCATTGGTTCTGCAGTATCTTGTGATGAAAGGTTTGAGGAAAAAGAATGCAAGCTTGGTTGAACCGTTTGCTCCGTCTAAGGAAATGTTCCTAAGAAAATATGTTCTCAGTTTTAAGGAGGATTCTGATTATTTATTAAAGCTTTATGAGGAAAACGTAAATCTTGCATCCACCAAGGAGAACATTGACATGCCATTCACCAAATAG 1164 0.3591 MAMLRYIIFNYHHYRAFISNNPHKSIPLFPFQFSHNFTTSQSDSFTVSYLINTIGFPREAALKASKRLRFNSPQKPNSVFNFFTNLGFSDSNIRSIIIKQPRLLSSDTHNSILPKFQFFLSKGASSSEIACLLAANPRILQNSLENRIIPLFEFYKRFFKSDKATICCIIRNLISLPYNLTTVNVKLLIDYGVCDSAIARLLLTRPAILGSIDFISTLEEVKGLGFHLSTSTFGAALVAKKCMSKTLWDEKVDVFKKWGWTDEDVIRAFRGRPELLLTSIDKINLVISFWVNQLGWNSLALSKRPRIFSYSLHKRIVPRALVLQYLVMKGLRKKNASLVEPFAPSKEMFLRKYVLSFKEDSDYLLKLYEENVNLASTKENIDMPFTK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1335 387 Pfam mTERF 245 349 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 Pfam mTERF 81 209 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 SMART mt_12 130 162 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Mtr2g1335 387 Gene3D Transcription termination factor 3, mitochondrial 173 364 IPR038538 -
Mtr2g1335 387 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 376 - -
Mtr2g1335 387 PANTHER CGI-12 PROTEIN-RELATED 18 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1335 Mtr-Chr2 14530793 14544343 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1335 mTERF 5.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1335 K15032 - gmx:102667698 343.199