Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1334 ATGTTGAAGAAACTGTTTCTTTCCCAGAATGTTGTTTTATGTCTCATCACAACAAAATCAACAACCCCAAAATTCAACAACCCTCTTTTCAACCAACACTTGTTGTTCCCAATTTCACTCAGAAGCTTCTGCACATCGGAATCAGACACACAACCATTTGCTGTATCATACCTCGTCAACAAATTTGGTTTCTCACATGAATCGGCTCTCAAAGCTTTCAACAACAGACAGGTTCGTTTCAATACCCCAGATAATCCTGATTCTGTTATCACCTTCTTTCAAAACCATGGCTTTTCACACGATAACATACGCATCATCATCACAAAAGCACCATGGTTACTTTCATCACAACCCCACAAAATGGTATTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTTCCTCTGATATTATTCGCCTGTTAACTGCAAATCCTAAAATTTTACAAAGTAGTTTGGAGAAACGAATAATCCCTCTTTTTCAATTGTTAAATAGGTTTTCGAAAACCAACAAGGATACCATTGTTTGCTTAATTCGAAATTCACTATCGTTTATTATTTATCCCTATCATGTTCTAGAGGCTAATATCAATTTGATGATTGAATTTGGAGTTTCTGATTCTAACATTGCTAGATTGCTTCAAACAAGGTCATCTATATTTGGTTCAACTGATTTGATTAAGTCATTAGAGGAAGTTAAGTGTTTAGGGTTTCATCCTTCAAAGACTACTTTTGGGGCTGCTTTGATAGCCAAGAAATGTAGTAAAAAACTTTGGGATGAGAAAGTTGATGTCTTTAAGAAATGGGGCTGGTCTGATGAAGTTGTCATCCGAGTATTTAGGTTTCAGCCTAATTTATTGGGTGCTTCCAATGGTAAGATTAATTTGTTGATGAATTTTTGGGTCAATCAATTGGGTTGGGATTCCTTGGCACTTACTAAATGTCCACTTATGTTTGGTTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAGTTACACCATTTACTTATTCCGAGAAATTGTTCTTGAGCAAGTGTGTTTTATGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGAAATTTGCACACACAATGGAAAACGATGGCATGGCATTCACTACAACAACAACAACCAAGCCTTATCCCACTAAAAGGGGTCGGCAATGGCATGGCATTCACTAA 1257 0.362 MLKKLFLSQNVVLCLITTKSTTPKFNNPLFNQHLLFPISLRSFCTSESDTQPFAVSYLVNKFGFSHESALKAFNNRQVRFNTPDNPDSVITFFQNHGFSHDNIRIIITKAPWLLSSQPHKMVLPKFQFLLSKGASSSDIIRLLTANPKILQSSLEKRIIPLFQLLNRFSKTNKDTIVCLIRNSLSFIIYPYHVLEANINLMIEFGVSDSNIARLLQTRSSIFGSTDLIKSLEEVKCLGFHPSKTTFGAALIAKKCSKKLWDEKVDVFKKWGWSDEVVIRVFRFQPNLLGASNGKINLLMNFWVNQLGWDSLALTKCPLMFGYSLHKRIIPRASVLQFLLMKGLRKKNASLVTPFTYSEKLFLSKCVLCFKEESDYLLKLYEEKMKFAHTMENDGMAFTTTTTTKPYPTKRGRQWHGIH* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1334 418 Pfam mTERF 91 296 IPR003690 GO:0003690|GO:0006355
Mtr2g1334 418 Pfam mTERF 255 361 IPR003690 GO:0003690|GO:0006355
Mtr2g1334 418 PANTHER CGI-12 PROTEIN-RELATED 13 389 IPR003690 GO:0003690|GO:0006355
Mtr2g1334 418 Gene3D Transcription termination factor 3, mitochondrial 170 378 IPR038538 -
Mtr2g1334 418 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 389 - -
Mtr2g1334 418 SMART mt_12 310 344 IPR003690 GO:0003690|GO:0006355
Mtr2g1334 418 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Mtr2g1334 418 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Mtr2g1334 418 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1334 Mtr-Chr2 14525657 14527162 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1334 mTERF 5.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1334 K15032 - gmx:102663414 342.043