Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1333 ATGTTGATTATTCATCGCCATAGATCCATTTTCAATCTCAAACCCTTAACTTTCTCACCAAACCCAATAACCCCATTACCATTTTCTCTTCATTTCTGCACCAACACTTCAGATTCAACCTCATTTTCTGTCTCATACCTCATCAACAATTTTGGCTTTGACCCACAATTTGCTTCCAAACTCTGCTCCACCTACAAGCTCCGTTTCAAGACTGACCAAAACCCTGATTCTGTTCTCAAATTCTTTAGAAACTATGGTTTCTCTAACTCCCAACTACGTCGTATCATTCCCAAGGCACCATGGCTACTCTCCTGCGACCCCTCCAAAAGGGTGTTGCCGAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTACCTCTGACATTGTTAACTTTATGAGTAAGAACCCCAGGATCTTGTCTGTAAGCTTGAAGAATCGTATCGTCCCAATATATGAATTGGTTTATAGATTCTTGCAATCTCACAAGGACACTATTGCTTGTGTAATTAGCAATCCAGTTTTATTTAGTGACCATCTTGTGGCACATAACATCGCATTGTTGCTTGAGAATGGACTTTCCGACTCAAACATTTCTAGATTGCTTAGGGAACACCGTAGGACATTGCACACATGTGACATTTTGAAGGTGGTGGATGAATTAAGGGATTTGGGGTTTAATCCTTCTAAAACAACTTTTGGAGTAGCATTAATAGCCAAATCATCAACAACTAAAGCCTTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAGTGGGGTTGGTCGGATGAAGATGTTCTTGAAGCATTTAAAAAGCAGCCTCACTGTATGATAACATCCATTGATAAAATTAATTTAGTGATGAGCTTTTGGGTCAATCAGTTGGGTTGGGATGCTAAGGACATTGCCAAAACACCGGATATTTTGTCGTTAAGTTTGGAAAAAAGGATCATTCCAAGAGCCACTGTCGTGCAATTTCTCCTTAGTAATGGTTTGCGAAATAAGAATGCAAGCTTAATTTATCCATTCTTAATGCCTGAGAAGTTGTTTCTTGATATGTTTATAAAACGTTTTGAGAATGCGGCTTCTTATCTTTTAAAGCTGTACGAAGAAAAACTCAATCTTGCACACACCAAGAACAAAAATTGCGTGTTATTCATCGTTATAGAGTCCTTCTACCTCTTGAAATCTCACCACGACACCCTTGCTTGTGCAGTTCACAATCGGAATTTCTTTGGAGCCACGCGTGTGTCAAATAATATCAAGTTGTTGATCAAGAATGGAGTGGCGGACTCAAACATTGTAAGATTGCTTCGGAGCCGGAGTCCGATATTCTATTCAGATCCAGGAGACATGCTGAAATTGGTGGAGGAATTAAAGGTTTTGGGTTTTAATCCTTCAAAAACATCTTTCAATCTAGCACTAATTGCCAAAGCAACTATAAACAAAACCCTATGGAAAGATAAAGTTGACACCTTTAAGAAATGGGGTTGGTCTGAACAAGTTATTTTCGAAGCATTTAGAAGGCGGCCTGAGTGTATGTTAGTATCCATTAATAAATTAAATTTAGTGATGAATTTTTGGGTTAATGAGTTGGGTTGGGATGCTCTTGCCCTTGCCTTAGATCCATCAGTTTTTGGTATAAGTTTCGAAAAAAGGACCATTCCAAGGGCCCCAATTGTGCAATTCCTGCTAAAGAAAGGTCTGCGAAAAAGGACTGCAAGCTTAACTTCTCCATTTATAGTGCCTGAGAAGTTGTTTCTTGATAAGTTTATAAAACGTTTTGAGAACGAGTCTTCTTATCTGTTAAAGCTGTATGAGGAAAAACTCAACCTTGGATACACCATAGACAAAACTTGCACGCCATGA 1863 0.3881 MLIIHRHRSIFNLKPLTFSPNPITPLPFSLHFCTNTSDSTSFSVSYLINNFGFDPQFASKLCSTYKLRFKTDQNPDSVLKFFRNYGFSNSQLRRIIPKAPWLLSCDPSKRVLPKFQFFLSKGASTSDIVNFMSKNPRILSVSLKNRIVPIYELVYRFLQSHKDTIACVISNPVLFSDHLVAHNIALLLENGLSDSNISRLLREHRRTLHTCDILKVVDELRDLGFNPSKTTFGVALIAKSSTTKALWKEKVDAFKKWGWSDEDVLEAFKKQPHCMITSIDKINLVMSFWVNQLGWDAKDIAKTPDILSLSLEKRIIPRATVVQFLLSNGLRNKNASLIYPFLMPEKLFLDMFIKRFENAASYLLKLYEEKLNLAHTKNKNCVLFIVIESFYLLKSHHDTLACAVHNRNFFGATRVSNNIKLLIKNGVADSNIVRLLRSRSPIFYSDPGDMLKLVEELKVLGFNPSKTSFNLALIAKATINKTLWKDKVDTFKKWGWSEQVIFEAFRRRPECMLVSINKLNLVMNFWVNELGWDALALALDPSVFGISFEKRTIPRAPIVQFLLKKGLRKRTASLTSPFIVPEKLFLDKFIKRFENESSYLLKLYEEKLNLGYTIDKTCTP* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1333 620 PANTHER CGI-12 PROTEIN-RELATED 21 376 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 PANTHER CGI-12 PROTEIN-RELATED 387 612 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 387 612 - -
Mtr2g1333 620 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 376 - -
Mtr2g1333 620 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 534 568 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 433 463 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 198 226 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 502 533 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 SMART mt_12 129 164 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 Pfam mTERF 79 226 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 Pfam mTERF 484 582 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 Pfam mTERF 247 339 IPR003690 GO:0003690|GO:0006355
Mtr2g1333 620 Gene3D Transcription termination factor 3, mitochondrial 151 359 IPR038538 -
Mtr2g1333 620 Gene3D Transcription termination factor 3, mitochondrial 386 599 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1333 Mtr-Chr2 14508024 14515487 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1333 mTERF 6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1333 K15032 - gmx:102663414 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4362 4 57688580 57690104 Mtr2g1333 2 14508024 14515487 PCT