Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1331 ATGTTTACTACTCATCGCCGTACAACCCTTCTCTATCTCAAGACCTTAACTTTCTCACCATCCCCCAAAAACCCATTACCATTTTCTCACTATTTTTCCACCAACACTTCAGATTCAACCTTTTTTGCCGTCTCTTACCTCATCAACAATTTTGGCTTTTCCCCACAATTTGCTTCCAAACTTTCCTCCACTTACAATGTTCATTTCAAAACTGCCCGAAAACCTGATTCAGTTCTCAACTTCTTTAGAAACCATGGTTTCTCTGATTCCCAAATACGCACTGTCATTGCAAAGGAACCACGGTTGCTTTCATGCGATCCCTTGAAAAGGGTTCTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACATTGTTAGTAAGAACCCTATGTTCCTTACTGCAAGCTTGGACAAGAAAATAGTTCCGACTTATGAATTGGTTTATAAATACTTGCAATCTGACAAACACATTCTTGCTTTGTTGAATTGCAATCCAACTTTCTTTGGAAGAAGTAGCGTGGAACATAACATCAGATTGTTGATTCAGAGTGGAGTTACAGACATAAATATTGCAAGATTGCTTCGGAACAATATTAAGTTTTTCATGACAGGCAACTTGCCTGAGTTGGTGAAGGAATTAAAGGATTTGGGGTTTCATCCGTCACAATCAATTTTCTCAGTAGCATTGATTGCCAAAACATATTTATCCAAAAGCCGATGGAATGAAAAAGTTGATGTCTTTAAGAAATGGGGATGGTCTGATGAAGATGTCCGTGAAGCATTTAAAAAGCAACCTCAATGTATGTTAACATCCATTGATAAAATAAACTCAGTGATGAACTTTTGGGTCAATCAGTTAGGTTGGGATGCTTTGGCCATTGCCAAAACACCAAGGGTTTTGGGGGCCAGTTTGGAGCGAAGGATCATACCAAGAGCCTCCGTTGTGGAATATCTTCTGAAGAGAGGTTTGCATAAAAAGGAAGCAAGTTTAACTTCTCCGTTTATAGTCATTGATAAGACATTCTATGACATGTATATAAATCGTTTTAAGGAGGAGTCTTCTTACCTATTAAAGCTTTACGAAGAAAATTTGAATCTTGCACAAACCAAGGAAAAAACTGGCATGATATGA 1152 0.3793 MFTTHRRTTLLYLKTLTFSPSPKNPLPFSHYFSTNTSDSTFFAVSYLINNFGFSPQFASKLSSTYNVHFKTARKPDSVLNFFRNHGFSDSQIRTVIAKEPRLLSCDPLKRVLPKFQFFLSKGASNSDIVNIVSKNPMFLTASLDKKIVPTYELVYKYLQSDKHILALLNCNPTFFGRSSVEHNIRLLIQSGVTDINIARLLRNNIKFFMTGNLPELVKELKDLGFHPSQSIFSVALIAKTYLSKSRWNEKVDVFKKWGWSDEDVREAFKKQPQCMLTSIDKINSVMNFWVNQLGWDALAIAKTPRVLGASLERRIIPRASVVEYLLKRGLHKKEASLTSPFIVIDKTFYDMYINRFKEESSYLLKLYEENLNLAQTKEKTGMI* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1331 383 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 375 - -
Mtr2g1331 383 PANTHER CGI-12 PROTEIN-RELATED 21 375 IPR003690 GO:0003690|GO:0006355
Mtr2g1331 383 Pfam mTERF 79 226 IPR003690 GO:0003690|GO:0006355
Mtr2g1331 383 Pfam mTERF 242 348 IPR003690 GO:0003690|GO:0006355
Mtr2g1331 383 Gene3D Transcription termination factor 3, mitochondrial 146 365 IPR038538 -
Mtr2g1331 383 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Mtr2g1331 383 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Mtr2g1331 383 SMART mt_12 129 165 IPR003690 GO:0003690|GO:0006355
Mtr2g1331 383 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1331 Mtr-Chr2 14490927 14494127 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1331 mTERF 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1331 K15032 - gmx:102663414 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4363 4 57696665 57699332 Mtr2g1331 2 14490927 14494127 PCT