Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1330 ATGTTGGCTGCACATCGTTATACACCTTTTCTCTATCTCAAGGCCCTAACTTTCTTACCAACCCCAAAACCTTACCCTCTTTTCCATCGATACCAATTACCAACATTTTCTCTTCCTTTTTGCACCAATACTTCAGATTCAACCTCTTTTGCAGTCTCATACCTCATCAACAATTTTGGCTTTTCCCCACAATTTGCTTCCAAACTTTGTTCCACTTACAAGGTTTGTTTCAAAACCAACCAAAAACCTGATTCAGTTGTCAACTTCTTTAGAAACCATGGTTTCTCAGACACTCAACTATGTCATATCATCATAAAGGAACCACGACTTCTTTCCTGCAAGCCCTGCAAAACGTTGTTGCCAAAGTTTCAATTTTGTCTCTCCAAAGGTGCTTCTACCTCTGACATTATTAAAATTGTCTGTAAGAGCCCCCATTTTTTGTATTCAAGCCTGGAGAATCAAATAGTCCCAACCTATGAATTGGTTTACAGATTCTTGCAATCTGATAACGACATTATTGCTTGTTCAATTCAAAATCCGGCTTTACTTAGTCACCGTCTTGTGCCACATAACATTCAATTTTTGATTGACAATGGAGTCACACACTCAAACATTGCAAAATTGCTTCGGTACTGGAGTCCGACGTTTCAGACACATCACATGCTGAAACTTGTGGAGGAATTAAAGGTTTTGGGGTTTAATCCTTCAAAAGTAACCTTTGGTGTAGCCTTGCGAGCCAAAACATCCGTAAGCAAAACTTTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAGTGGGGTTGGTCTGATGAAGATATTATGAAAGCGTTTAAAAAGCGGCCTGATTCTATGTTAACATCTATTGATAAAGTTAATTTAGTGATGGGCTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCATTGCCAAAACACCATTAATTTTGTCGTTAAGTTTGGAAAAAACAATCATTCCGAGGGCCCTTGTTGTGCAATATCTTCTGAGTAAAGGTTTGAGAAATAAGAGTGCAAGCTTAACTTATCCATTTGTTGTTACTGAGAAGAGGTTTCTTGATAGGTTTATAAAACATTTTGAGAATGAGGCTTCTAATATGTTAAAGCTGTACGAGGACAAACTCAATCTTGCATACACTAGGGACAAAACTTGCATGTCATGA 1176 0.3827 MLAAHRYTPFLYLKALTFLPTPKPYPLFHRYQLPTFSLPFCTNTSDSTSFAVSYLINNFGFSPQFASKLCSTYKVCFKTNQKPDSVVNFFRNHGFSDTQLCHIIIKEPRLLSCKPCKTLLPKFQFCLSKGASTSDIIKIVCKSPHFLYSSLENQIVPTYELVYRFLQSDNDIIACSIQNPALLSHRLVPHNIQFLIDNGVTHSNIAKLLRYWSPTFQTHHMLKLVEELKVLGFNPSKVTFGVALRAKTSVSKTLWKEKVDAFKKWGWSDEDIMKAFKKRPDSMLTSIDKVNLVMGFWVNQLGWDAMAIAKTPLILSLSLEKTIIPRALVVQYLLSKGLRNKSASLTYPFVVTEKRFLDRFIKHFENEASNMLKLYEDKLNLAYTRDKTCMS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1330 391 PANTHER CGI-12 PROTEIN-RELATED 16 383 IPR003690 GO:0003690|GO:0006355
Mtr2g1330 391 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 383 - -
Mtr2g1330 391 Pfam mTERF 249 357 IPR003690 GO:0003690|GO:0006355
Mtr2g1330 391 Pfam mTERF 87 213 IPR003690 GO:0003690|GO:0006355
Mtr2g1330 391 Gene3D Transcription termination factor 3, mitochondrial 164 373 IPR038538 -
Mtr2g1330 391 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Mtr2g1330 391 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Mtr2g1330 391 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Mtr2g1330 391 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1330 Mtr-Chr2 14486671 14488306 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1330 mTERF 4.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1330 K15032 - gmx:102663414 395.971