Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1329 ATGTTTAAGAATATACTATGGCGACACAGAACAACCCTTCTAAACCCTAACCCTCTTTTCCACCATTGCCCATTACCCTTTCCTCTCCATTTTTGCACCAACACTTCAGATTCAACCTCTTTTGCTGTCTCCTACCTCATCAACAATTTTGGCTTTGACCCACAATCTGCTTCCAAACTTTCCTCCACTTACAATGTTACTTTCAAGAATGCCCAAAAACCTGACTCTGTTCTCACCTTCTTTAGAAACTATGGTTTCTCAGATTCCCAACTACGTCATACCATTTCAAAGGAACCATGGCTGCTTTCCTGCAACCCTTCTAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTACATCTGACATTGTTAACATTATCACTAAGAACCCCAACATCCTGAAAGCAAGCCTTGATAATAAAATTATCCAAGCCTATCAATTGATTTATAGATTCTTGCAATCAGACAAGGTCATTATTGATTGTGTTATTCGCAATCCATCTTTCTTTGGAGACGCTCGTGTGGTATCTAACATTAGATTGCTGATTGCCAATGGAGTGGCCGACTTAAACATTAAAAGAATGCTTTGCGTAAGGAGTAGGGCATTTCAGACACCGACACGTGACATGCTGAAATTGGTGGAGGAATTAAAGGATTTGGGTTTTACTCCTTCAAAATCAACCTTTGGTGTAGCGTTGCTAGCCAAACTATCTGTAAAGAAAACATTGTGGGAAGAGAAAGTCGATGCCTTTAAGAAGTGGGGTTGGTCTGCTGAAGATGTTCTACAAGCATTTAGAAGGCAACCTCATTGTATGTTAACATCCATTGATAAAATTAATCTAGTGATGAACTTTTGGGTCAATCAGTTGGGTTGGGATGCACTTGCCCTTGCCAAAGGACCATCAGTTTTTTCTTTAAGTTTTGAAAAGAGGGTCCTTCCAAGGGCCTCTGTATTGCAATATCTTCTGAAGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAACTTGTCCATTTGTAGTGTCTGAGAAGCTGTTTCTTGATACGTGTATAAAGGGTATTAAGGAGTCTTCTTATCTATTAAAGTTGTATGAGGAAAAACTCAATCTTGCTTACACCATGGACAAAACATGCACATCATGA 1152 0.3915 MFKNILWRHRTTLLNPNPLFHHCPLPFPLHFCTNTSDSTSFAVSYLINNFGFDPQSASKLSSTYNVTFKNAQKPDSVLTFFRNYGFSDSQLRHTISKEPWLLSCNPSKRVLPKFQFFLSKGASTSDIVNIITKNPNILKASLDNKIIQAYQLIYRFLQSDKVIIDCVIRNPSFFGDARVVSNIRLLIANGVADLNIKRMLCVRSRAFQTPTRDMLKLVEELKDLGFTPSKSTFGVALLAKLSVKKTLWEEKVDAFKKWGWSAEDVLQAFRRQPHCMLTSIDKINLVMNFWVNQLGWDALALAKGPSVFSLSFEKRVLPRASVLQYLLKKGLRKKNASLTCPFVVSEKLFLDTCIKGIKESSYLLKLYEEKLNLAYTMDKTCTS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1329 383 Pfam mTERF 179 349 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 Pfam mTERF 78 226 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Mtr2g1329 383 Gene3D Transcription termination factor 3, mitochondrial 151 360 IPR038538 -
Mtr2g1329 383 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 12 375 - -
Mtr2g1329 383 PANTHER CGI-12 PROTEIN-RELATED 12 375 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1329 Mtr-Chr2 14478647 14483147 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1329 mTERF 3.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1329 K15032 - gmx:102663414 384.03