Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1328 ATGGTTCAAGTTGATAACATTGAAGATCAAAGAGACGAAAAATTAATTCGGATTGGAAACAAATACCAAGCAGAAATTCCATCTTTCATATTGAAATTCGACTGCAATTATTCTCCAGAGAGTCCAGATGATACTACAAAGACACCTACCTTCAACAAATGTTCAAATGATACTTGGACTAAACCAGAAGTAGACAGTTTAATGCTTGGATTGTTTATATTTGGCAAAAACTTTTCTCAACTGAAAAGATTCATTGGTAGCAAGACCATAGGTGAAGTACAATTTTTCTACTATGCAAAATTCTACAAGTCAGAGAATCATATAAGGTGGCATGCATATAAGAAAGCAATAAAAGATAATGAAGGTAAGGGAAAACTTATGTCAGAACCAACACATCATCAACAAATTTTGCGTCATTTACTCAACAATGAGTCCGAGGAATGGTGCAATAAAATATTCGAGGTGTGTAAGAATTTTTGGGGAGGAAAATTGCCGCTCGAAGACTACGTTTTTGCTTTGAAGGATGTAGTTGGAGTTGAAGCTTTTGTCGATGCAGTAGGAATTGGTACACAAAATGATCCTACAAATCTTGAAGGAAATGCTATGAAGTCTATCTATGAAATTCTTGAAGAAAAAGATTTCTCCAAGATTACATCATATATAGAAATAGTACACATCCTTTCAGGTGATTTTAGAATAAGCAAGACGCAAGCAAGCGACATTTTCTGGGAGTCTGTTTGGCCTCGTTTACTAGCAAACGGTTGGCATTCAGAGCAACCTAGTAGTCTTCTTTCTAATAAGAGTGCTATAATTTTCATTGTCCCTGGAATTGAAGAATATTCGAGGAAACTCGTGAAGGGTGTTGATTATTTTGATTCTATCAAAGAACTCCTCGATGAAGTTGCTGCATACCCTCTACTAATCAAAGATCCTGCTTCGAAAAATGATTCTGATAGAAAAGACTCTAAAGGGAAGCAGATAAAGGAATCCGATTACGTTGCTGTAAGGTACTTGGATAAGGGGAGCACTAGTGGAGCATCTGCCAACTTTGAAAAAACTCCTTCAGTAGAAACTACTATTGATCTTAACTTAGCAGTGACCTTTGAAAAAGTTGATGGTGATGAAACTATGGTGAATGAAGTTCCTGCTGAGGTCAAATTTGATGACTCTAATGCTGTTACAGTTCCAACATCAGAGGGTCACATCGGGAATCAAGCTGTAGAAACTCCGAGGAAGAGTAGAAGACCTTCAAAACCAACAAAGAGAGCATTGGAAGCTGTTGTCGATAAGTATGAAGAGGATACGAGACTTAACACTTGGAAAATAGGCAACCAAGATCCTATCTTCAAGCAATACAGCTTGCCAAAGGGTGAGGTTGGTTACCCCAGTGGAATTTTTAACCCTTTGAACTTTGCACCAACTTTGGAGGCTAAAGAGAAGGAAATTTCTAACGGTAGATTGGCAATGTTGGCATTCTTGGGATTTATCAGTCAGCACAATGTCACAGGAAAAGGACGATTTGATAACCTCTTGGAGCACCTTTCAGACCCATGGCACAACACCATTGTTCAAACACTGAGTGGCGGCAACTAA 1593 0.381 MVQVDNIEDQRDEKLIRIGNKYQAEIPSFILKFDCNYSPESPDDTTKTPTFNKCSNDTWTKPEVDSLMLGLFIFGKNFSQLKRFIGSKTIGEVQFFYYAKFYKSENHIRWHAYKKAIKDNEGKGKLMSEPTHHQQILRHLLNNESEEWCNKIFEVCKNFWGGKLPLEDYVFALKDVVGVEAFVDAVGIGTQNDPTNLEGNAMKSIYEILEEKDFSKITSYIEIVHILSGDFRISKTQASDIFWESVWPRLLANGWHSEQPSSLLSNKSAIIFIVPGIEEYSRKLVKGVDYFDSIKELLDEVAAYPLLIKDPASKNDSDRKDSKGKQIKESDYVAVRYLDKGSTSGASANFEKTPSVETTIDLNLAVTFEKVDGDETMVNEVPAEVKFDDSNAVTVPTSEGHIGNQAVETPRKSRRPSKPTKRALEAVVDKYEEDTRLNTWKIGNQDPIFKQYSLPKGEVGYPSGIFNPLNFAPTLEAKEKEISNGRLAMLAFLGFISQHNVTGKGRFDNLLEHLSDPWHNTIVQTLSGGN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1328 530 Gene3D - 3 112 - -
Mtr2g1328 530 ProSiteProfiles SANT domain profile. 55 106 IPR017884 -
Mtr2g1328 530 PANTHER ATROPHIN-RELATED 34 359 - -
Mtr2g1328 530 PANTHER ATROPHIN-RELATED 358 436 - -
Mtr2g1328 530 Gene3D Chlorophyll a/b binding protein domain 425 530 - -
Mtr2g1328 530 Pfam Chlorophyll A-B binding protein 451 499 IPR022796 -
Mtr2g1328 530 PANTHER PROTEIN, PUTATIVE-RELATED 34 359 - -
Mtr2g1328 530 PANTHER PROTEIN, PUTATIVE-RELATED 358 436 - -
Mtr2g1328 530 SUPERFAMILY Chlorophyll a-b binding protein 455 526 - -
Mtr2g1328 530 SUPERFAMILY Homeodomain-like 53 100 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1328 Mtr-Chr2 14461260 14465979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1328 444 527 Chloroplast and Mitochondria Gene Families AT3G61470 46.667 5.62e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1328 - - mtr:MTR_2g436970 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1328 2 14461260 14465979 Mtr2g1328 2 14461260 14465979 ECH