Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1313 ATGAAACCTTATCAGTTTTCATCACATAATAATCTTTTAACAATGTCTACTTCTTCATGGCTAACTTCTCCTTCATGCACCCTTTTACCTGTAGATTCATCTTCCTCTACACCAGAACTCATAATTCAATGGTTAAGGTTCATTTTGCTATCTCCATGTCCTCAGAGACTTCTTGTTTCTGCTCTTGATTCCTTGTTTTTGCTCTTTCTCTTAGCTTTTGCAGCTCAAAAACTCTATTCAAGATTCTATTCAAGAGCAAACACTAGCTCCTCAATCACAAAACCACTTCTGCAGGACAAAGATTCTGACTATAGAATCACCTTTTGGTTCAAACTAGCCTTTTTGGTAACTACCCTTTTGGCTATAAGTTACACTGTTCTAGGAATCTTGGCTTTTACTCAAACCAATAAACTTTCTTCATGGAAACAAATAGAAGCACTTTTTCGGTTGTTTCAAGCAATAACCAACATAGTGATAGTGATACTAATGGTACATGAGAAAAAGTTCAAATCTTCCAAACACCCTTTATCACTAAGAATCTATTGGATAGCAAACTTTGTAATTGCAACTTTGTTTGCTGCTTCAGCTATTGTTCGATTGATAACTGTCGGTGAAGAAAAGTTGGAGCTTAGTTTGAAAATAGATGATATATTCTCATTGGTTAATCTTCCATTATCTGTGTTCTTTTTTGTGATATCCGTAAAAGGGTCATCAGGTATTCACGTGATAAGAATATCCGATGTAGTAGCAACATATCGGTCAATTTCGACCGATAGAACTTTGAGTCCTTATGCTTGTTCGTCATTTTTGTCTAAAACAGGGTGGTTTTGGATGAACCCTTTACTCAATAAAGGTTACAAAACACCCCTTAAACTAGAAGATGTACCTTCACTTCCTCTTGATTTTAGAGCAGAAAAAATGTCTGAACTTTTTCAAAGCAATTGGCCAAAACCAGAGGAAAACAGTAAGCATCCAGTTGGAGTTACCCTTTTTAGGTGTTTTTGGAAACAAATAGCTTTCACGGGCTTCATTGCAGTCATTAGGCTTTGTGTTATGTATGTTGGTCCCTTGTTGATTCAAAGTTTTGTTGATTTCACATCAAGGAAAGATAGTACGACTAGTGAAGGTATTGTTTTGATATGTGTCCTTTTTGCAGCAAAATCAGTTGAAGTACTTAGTGTTCATCAATTTAACTTCCACTCTCAAAAACTCGGTATGCTTATTCGTTCGAGCATAATCACTTCAGTTTACAAAAAGGGTTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGCCAAATTGTTAATCACATGGCTGTTGATGCTCAACAGCTCTCAGATTTGATGATGCAGTTTCATCCTATATGGTTGATGCCATTGCAAGTTGGTGCTGCATTGGCTCTTATGTACAGCTATGTTGGTCTATCAGTACTTGCAGCAGTGTTTGGAACTAGCATAGTGTTTCTCTTCACACTCTATCGAACGAAGAGTAGTAATAGTTTCCAGTTTAAGATAATGACGAGCCGCGATTCGAGGATGAAGGCGACAAACGAGTTACTTAACAACATGCGTGTGATTAAGTTTCAAGCGTGGGAAGAGTACTTTGGTAACAAAATTCAACAGTTTCGCGAAGCTGAGCATGGATGGATTGCGAAATTCTTGTACTATTTTGCAGTTAACATAGGAGTTTTGGGTACTGCCCCATTAGCTGTAACTGTTCTTACCTTTGGAACTTCAACTTTAATTGGAATTCCTTTGAATGCCGGCACTGTATTTACAATAACTTCGATTATCAAGATTCTTCAAGAGCCTGTGAGGACTTTCCCGCAAGCTCTTATAATGATTTCTCAAGCAACAATATCTTTAGGGAGGTTGGATGAGTTCATGGTGAGTAAGGAAATGGATGAGAATGCAGTGCAAAGAGAGGAGAATTGTGATGGTGATGTAGCCGTGGAGATAAAAGATGGGAAATTTTCATGGGATGATAAGGATGAGAATGAGGCGTTGACAGTGGAAGAGTTGGTAATTAAGAAAGGGGACCGTGCTGCTATTGTAGGAACTGTTGGTTCAGGCAAGTCTTCATTATTGGCTTCTGTGTTGGGAGAAATGTTCAAGATCTCAGGAAAGGTCAGAGTTTGTGGGACGACGGCATATGTAGCACAAACATCATGGATTCAGAATGCAACCATCAAAGAAAACATATTGTTTGGCTTACCAATGAACTTGGAAAAGTACAGGGAAACTTTAAGAGTGTGCTGCCTTGAAAAGGATCTTGAAATGATGGAAGATGGTGATGAAACTGAGATTGGAGAGCGAGGTATTAACCTCAGTGGTGGCCAGAAACAACGGGTACAACTTGCTAGAGCTGTATATCATGACACTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCTGAAACAGGATCATTTATTTTTAAGGAATGTATCATGGGAGCTCTCAAAGATAAGACTGTTTTACTTGTAACCCACCAAGTTGATTTCTTGCATAATGTTGACTCTATAATGGTGATGCGTGAAGGGAGAGTAGTACAAAGTGGAAAGTATGATGAACTTCTCAAAGCAGGTCTAGATTTTGGTGCACTTGTGGCAGCTCATGAATCCTCAATGGAAATTGCAGAAACAAGTGATAAAACTAGCGATGAATCTGCTCAGTCTCCAAAATTAGCTCGCATCGCTTCGAAAGAAAAAGAAAGCGCGCTAGAAAAGCAGTCTTCTCTAGATAAACCTAAGTCTGATAAAACTGCAGCAAAGCTCATTGAAGACGAGGAAAGAGAAACTGGACGTGTAAACCTTAAAGTATACAAACATTATTTCACAGAAGCATTTGGATGGTGGGGAATAGCACTCATGGTAGCAATGTCAGTGGCTTGGATGCTGTCATTTTTGGCTGGTGATTATTGGCTAGCAATTGCTACTGCAGATGATTCTGGCATTCCTTCTTTCACTTTCATTACTGTCTATGCTGTTATAGCTGTTGTTGCATGCATAGTTGTTATGGTGAGAGCTCTCTTGTTTACTTATTGGGGTTTAAAGACATCTCAAAGCTTCTTCATTGGATTGCTTCAAAGTATCCTTCACGCACCAATGTCATTCTTTGATACTACTCCTTCAGGCAGAATTTTGAGTCGTGTATCTACCGATATACTTTGGGTTGATATATCAATTCCAATGTTGGTAAACTTTGTAATGGTAGCATACTTATCATTATTCAGTATCCTCATTGTCACATGTCAGAATTCTTGGGAGACTGTCTTCCTCTTAATTCCACTGTTTTGGCTCAACAACTGGTATAGGAAATTTTATCTTGCAACTTCTAGGGAATTGACTCGACTTGATTCAATCACAAAAGCTCCGGTGATTCATCACTTTTCAGAGACCATTTCTGGTGTTATGACAATCCGTTGCTTAAGAAAGCAGAATGCATTTTCTCAAGAAAATATTGACAGGGTGAATGCAAGTCTAAGAATGGATTTTCATAACAATGGTGCAAATGAATGGCTTGGTTTTCGTTTGGACTATATGGGAGTTGTTTTCCTTTGCATTGCCACCCTTTTTATGATCTTTTTGCCAAGTGCTATTGTTAAGCCAGAATATGTTGGTTTGTCTCTATCATATGGACTGTCTTTGAGTGGTCTCTTGTCATTTACCATAACAATGACTTGCAGTGTTGAAAACAAAATGGTTTCTGTTGAGAGGATAAAACAGTTTACTAACCTTCCATCAGAAGCTCCATGGAAAATTGCTGATAAGTCTCCTCAGAATTGGCCTAGTCACGGAACTATAGAGTTACATAATTTAGAGGTTAGGTATAGGCCAAACACTCCTCTAGTTCTTAAGGGAGTCTCTCTAACAATTGAAGGTGGAGAAAAAGTTGGCGTTGTTGGCCGTACAGGAAGTGGAAAATCAACACTCATTCAAGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGAAAAATAATCATTGATGGTATTAACATTTCCAATGTTGGTCTTCATGATTTGAGGTCACGTTTTGGAATTATTCCACAAGAGCCTGTCCTCTTTCAAGGAACAGTAAGAACCAACATTGATCCTCTTGGATTGTATTCAGAAGAAGAAATTTGGAAGAGTCTTGAGCGGTGCCAATTGAAAGAAGTGGTGGCTGCAAAGCCTGAGAAACTCGACGCTTTAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGGCAACTTCTATGCTTGGGAAGGATCATGTTAAAACGCAGCAAAATATTATTCATGGATGAAGCAACAGCATCAGTTGATTCGCAAACTGATGCTGTAATACAAAAGATCATCAGAGAGGATTTTGCAGATCGTACAATTATTAGCATTGCTCACAGAATACCAACAGTTATGGATTGTGACAGGGTTTTGGTCATAGATGCAGGTTTTGCAAAGGAATATGACAAGCCATCACGTTTGCTTGAAAGGCCTTCACTTTTTGCAGCATTGGTTAAGGAGTATTCTAATAGATCAGCTTAA 4542 0.3866 MKPYQFSSHNNLLTMSTSSWLTSPSCTLLPVDSSSSTPELIIQWLRFILLSPCPQRLLVSALDSLFLLFLLAFAAQKLYSRFYSRANTSSSITKPLLQDKDSDYRITFWFKLAFLVTTLLAISYTVLGILAFTQTNKLSSWKQIEALFRLFQAITNIVIVILMVHEKKFKSSKHPLSLRIYWIANFVIATLFAASAIVRLITVGEEKLELSLKIDDIFSLVNLPLSVFFFVISVKGSSGIHVIRISDVVATYRSISTDRTLSPYACSSFLSKTGWFWMNPLLNKGYKTPLKLEDVPSLPLDFRAEKMSELFQSNWPKPEENSKHPVGVTLFRCFWKQIAFTGFIAVIRLCVMYVGPLLIQSFVDFTSRKDSTTSEGIVLICVLFAAKSVEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVGAALALMYSYVGLSVLAAVFGTSIVFLFTLYRTKSSNSFQFKIMTSRDSRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIAKFLYYFAVNIGVLGTAPLAVTVLTFGTSTLIGIPLNAGTVFTITSIIKILQEPVRTFPQALIMISQATISLGRLDEFMVSKEMDENAVQREENCDGDVAVEIKDGKFSWDDKDENEALTVEELVIKKGDRAAIVGTVGSGKSSLLASVLGEMFKISGKVRVCGTTAYVAQTSWIQNATIKENILFGLPMNLEKYRETLRVCCLEKDLEMMEDGDETEIGERGINLSGGQKQRVQLARAVYHDTDIYLLDDVFSAVDAETGSFIFKECIMGALKDKTVLLVTHQVDFLHNVDSIMVMREGRVVQSGKYDELLKAGLDFGALVAAHESSMEIAETSDKTSDESAQSPKLARIASKEKESALEKQSSLDKPKSDKTAAKLIEDEERETGRVNLKVYKHYFTEAFGWWGIALMVAMSVAWMLSFLAGDYWLAIATADDSGIPSFTFITVYAVIAVVACIVVMVRALLFTYWGLKTSQSFFIGLLQSILHAPMSFFDTTPSGRILSRVSTDILWVDISIPMLVNFVMVAYLSLFSILIVTCQNSWETVFLLIPLFWLNNWYRKFYLATSRELTRLDSITKAPVIHHFSETISGVMTIRCLRKQNAFSQENIDRVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATLFMIFLPSAIVKPEYVGLSLSYGLSLSGLLSFTITMTCSVENKMVSVERIKQFTNLPSEAPWKIADKSPQNWPSHGTIELHNLEVRYRPNTPLVLKGVSLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINISNVGLHDLRSRFGIIPQEPVLFQGTVRTNIDPLGLYSEEEIWKSLERCQLKEVVAAKPEKLDALVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVLVIDAGFAKEYDKPSRLLERPSLFAALVKEYSNRSA* 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1313 1513 Gene3D ABC transporter type 1, transmembrane domain 922 1255 IPR036640 GO:0005524|GO:0016021
Mtr2g1313 1513 Gene3D ABC transporter type 1, transmembrane domain 328 636 IPR036640 GO:0005524|GO:0016021
Mtr2g1313 1513 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 73 1513 - -
Mtr2g1313 1513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 339 619 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1313 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 650 872 IPR027417 -
Mtr2g1313 1513 SUPERFAMILY ABC transporter transmembrane region 330 631 IPR036640 GO:0005524|GO:0016021
Mtr2g1313 1513 ProSitePatterns ABC transporters family signature. 778 792 IPR017871 GO:0005524
Mtr2g1313 1513 MobiDBLite consensus disorder prediction 906 926 - -
Mtr2g1313 1513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1275 1507 IPR003439 GO:0005524
Mtr2g1313 1513 Gene3D - 1258 1507 IPR027417 -
Mtr2g1313 1513 CDD ABC_6TM_ABCC_D1 340 627 IPR044746 GO:0140359
Mtr2g1313 1513 Pfam ABC transporter transmembrane region 979 1201 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1313 1513 Pfam ABC transporter transmembrane region 340 607 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1313 1513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 956 1237 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1313 1513 CDD ABC_6TM_ABCC_D2 955 1249 IPR044726 GO:0140359
Mtr2g1313 1513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 653 876 IPR003439 GO:0005524
Mtr2g1313 1513 SMART AAA_5 1299 1483 IPR003593 -
Mtr2g1313 1513 SMART AAA_5 680 861 IPR003593 -
Mtr2g1313 1513 CDD ABCC_MRP_domain2 1271 1491 - -
Mtr2g1313 1513 SUPERFAMILY ABC transporter transmembrane region 956 1256 IPR036640 GO:0005524|GO:0016021
Mtr2g1313 1513 CDD ABCC_MRP_domain1 653 853 - -
Mtr2g1313 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1264 1506 IPR027417 -
Mtr2g1313 1513 Pfam ABC transporter 676 804 IPR003439 GO:0005524
Mtr2g1313 1513 Pfam ABC transporter 1290 1438 IPR003439 GO:0005524
Mtr2g1313 1513 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 73 1513 - -
Mtr2g1313 1513 Gene3D - 648 879 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1313 Mtr-Chr2 14302246 14328603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1313 653 905 Calmodulin-binding Proteins AT2G36910 30.435 3.48e-27 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1313 - K05665 gmx:100780167 2453.32