Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1312 ATGTCTTCTTCTTCTTCTGCATGGCTAACTTCTCCTTCATGCACCCTTTTACCTATACATTCATCTTCCTCTACACCACAATTCATACTTCAATGGTTAAGGTTCATTTTCCTATCTCCTTGTCCTCAGAGACTTCTTCTTTCTGCTCTTGATTCCTTGTTTTTGCTCTCCCTCTTAGCTTTTTCAGCTCAAAAACTCTATTCAAGATTCTATTCAAGTTCCAACTCTACCTCCTTAATCACAAAACCACTTCTGCAAAAGAACGATTCTGACTATAGAATCACCTTTTGGTTCAAACTAGCCTTTTTGTTAACTACCCTTTTGGCTATAAGTTACACTGTTCTAGGAATCTTGGCTTTTACTCAAACCAATAACCTTTCTTCATGGAAACAAATAGAAGCACTTTTTCGGTTGTTTCAAGCAATAACCAACATAGTCATAGTGATTCTAATGGTACATGAGATAAAGTTGAAAGCTTCCACACACCCTTTACCACTTAGAATTTATTGGGCAGCAAACTTTGTGATTGCTTCTTTGTTCACTGCTTCAGCTATTGTTCGAATGATAACCGTTGGTGAAACAAAGTTGGAGCTTAATTTGAGAATAGATGACATATTCTCTTTGGTTAATCTTCCATTATCTGTGTTCTTTTTTGTCATATCAATAAAAGGGTCATCAGGTATTCATGTGATAAGAATATCCGATGTAGTAGCAACATATCCATCAGTTTCCACCGATAGAACTTTGAGTCCTTATGCCTGTTCTTCAGTTTTGTCCAAAACAGTTTGGTATTGGATGAACCCTTTGCTTAATAAAGGTTACCAAACACCCCTTAAACTAGAAGATGTACCTTTACTTCCTCTCGATTTTAGAGCAGAAAAAATGTCAGAACTTTTTCAAAACAATTGGCCAAAACCAGAGGAAAATAGTAAGCATCCAGTTGGAGTTACCCTTTTTAGGTGTTTTTGGAAACACATAGCTTTTACGGGCTTCCTTGCAATCATTAAGCTTTGTGTTATGTATGTTGGTCCCTTGTTGATTGAGAGTTTTGTTGATTTCACATCAAGGAAAGATGGTACGAGTAGTGAAGGTATTGTTTTGATATCGATCCTTTTTGCGGCAAAATCACTTGAAGTACTTAGTAGTCATCAGTTCAACTTCCACTCTCAGAAACTTGGTATGCTTGTTCGTTCGAGCATAATCACTTCAGTTTACAAAAAGGGCTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGACAGATTGTGAATCACATGGCTGTTGATGCTCAACAACTCTCAGATTTGATGATGCAGTTTCATCCTATATGGTTGATGCCATTGCAAGTTTCCGCTGCATTGTTTCTTTTGTATAGCTATGTTGGCGTGTCTGTCGTGGCATCAATTCTTGGTATTGCCATTGTCTCTTTCTTTACTCTATATCGAACAAAGAGTAGTAATAGTTTTCAGTTTCAGATAATGAGGAGCCGTGATTCGAGGCTGAAGGCGACAAATGAGTTGCTTAACAACATGCGTGTGATTAAGTTTCAAGCGTGGGAAGAGTACTTCGGTAACAAGATTCAACAGTTTCGTGAAGCCGAACATGGATGGATTGGGAAATTCTTGTACTATTTTGCAGTTAACATGGGAATTCTGGGTACTGCTTCAATAACTGTAGCTGTTCTTACCTTTGGAACTGCAACTTTTATAGGAACTCCTTTGAAGGCCGGCACAGTTTTTACAATAACTTCGATTATCAAGATTCTTCAAGAGCCTCTGAGGACTTTCCCTCAGGCTCTTATCAATATTTCTCAAGCAACTATATCTTTAGGGAGGTTGGATGAGTTCATGATGAGTAAGGAAATGGATGATAGTGCTGTGCAAAGAGATGAGAGTTGTGGTGGTGATGTAGCTGTGGAGATAAAAGATGGGAAATTTTCTTGGGATGATAACGATGAGAATGAGGCGTTGACAGTTGAAGAGTTGGTAATTAAGAAAGGGGACCATGCTGCTATTGTAGGAACAGTTGGATCGGGCAAGTCTTCATTATTGGCTTCTGTGTTGGGAGAAATGTTCAAGATCTCAGGAAAGGCTAGAGTTTGTGGGACGACGGCATATGTAGCACAGACATCATGGATTCAGAATGCAACCATCAAAGAAAACATATTGTTTGGTTTACCAATGAACATGGAAAAGTACAAAGAAGCTTTAAGAGTGTGCTGCCTTGAAAAGGATCTTGAAATGATGGAATATGGTGACGAAACTGAGATTGGAGAGCGCGGTATTAACCTCAGCGGAGGCCAGAAACAACGCATACAACTTGCTAGAGCTGTATATCAAGACAGTGACATCTATCTCCTTGATGATGTATTCAGTGCCGTTGATGCTCAAACAGGATCATTTATTTTTAAGGAATGTATCATGGGAACTCTTAAAGATAAAACTGTTTTACTTGTAACACATCAAGTTGATTTCTTGCATAATGTCGACTCTATAATGGTGATGCGAGAAGGGAGAGTAGTGCAAAGTGGAAAGTATGATGAACTTCTCAAAGCAGGCCTAGATTTTGGTGCACTCGTGGCAGCTCATGAATCCTCGATGGAAATTGCACAAACAAGTGATGATTCTGCTCAATCTCCAAAACTGGCCCACATTTCTTCGAGAGAAAAAGAAAGCGCGGTAGAAAAGAAGTCTTCTCAAGATAAATCTAAGTCTAATAAAACTGCAGCAAAGCTCATTGAAGATGAGGAAAGAGAAACTGGACGTGTAAACCTTAAAGTATACAAACATTATTTCACAGAAGCATTTGGATGGTGGGGAATAGCACTCATGGTAGCAATGTCAGTGGCTTGTATGCTGTCAACTTTGGTTGGCGATTATTGGCTAGCAACTGCAACTGCAGATGATTCTGGAATTCCTTCTTCCACTTTCATTACTGTCTATGCTGTTATAGCTGTTGTTGTATGCATAGTTGTTATGTTGAGAGCTCTCTTGTTTACTTATTGGGGTTTAAAGACATCTCAAAGCTTCTTCGTTGGAATGCTTCAAAGTATCCTTCATGCACCAATGTCATTCTTTGATACTACTCCTTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGGTGGATATACAAATTCCCATGTTTGTAAACTTTCTAACGACGACATACTTAGGATTATTCAGTATCCTCATAGTCACGTGCCAGAATTCTTGGGAGACTGTCTTCCTCTTAATTCCACTGTTTTGGCTCAACAACTGGTATAGGAAATATTATCTTGCAACTACTAGGGAATTGACTCGACTTGATTCAATCACAAAAGCTCCTGTGATTCATCACTTTTCAGAGACCATTTCTGGTGTTATGACAATTCGTAGCTTAAGAAAGCAGAATGCATTTTCTCAGGGAAATGTTGACAGGGTGAATGCAAGTATAAGAATGGATTTTCATAACATTGGTGCAAATGAATGGCTTGGTTTTCGCTTGGACTATACGGGAGTGATTTTCCTTTGCATTGCCACCCTTTTTATGATCTTTTTGCCAAGTGCTATTGTTAGGCCAGAATATGTTGGTATGTCTCTGTCCTATGGCCTCGCTCTGAGTGGTCTCTTGTCAGCTTCCATATTTATGTCTTGCAATGTTGAGAACAAAATGGTTTCGGTTGAGAGGATAAAACAGTTTACTAACCTCCCATCTGAAGCTCCATGGAAAATTGCTGACAAGTCTCTTCCACATAATTGGCCTAGTCATGGCACTATAGAGTTAAATAATTTACAGGTTAGGTATAGACCAACAACTCCTCTAGTTCTTAAGGGAGTCTCTCTAACAATTGAAGGTGGAGAAAAAGTCGGTGTTGTTGGCCGTACAGGAAGTGGAAAATCAACACTCATTCAAGTGTTATTTAGATTGATTGAGCCTTCAGCTGGAAAAATAATCATTGATGGTATTAACATTTCCAATGTTGGCCTTCATGATTTGAGGTCGCGTTTTGGAATTATTCCACAAGAGCCTGTCCTCTTTCAAGGAACAGTAAGAACCAACATTGATCCTCTTGGCTTGTATTCAGAAGAAGAAATCTGGAAGAGTCTTGAGCGGTGTCAATTGAAAGAAGCTGTGGCTGCAAAGCCTGAGAAACTTGACGCTTTAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGGCAACTTCTGTGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTATTCATGGATGAAGCAACAGCATCAGTTGATTCGCAAACTGATGCTGTATTACAAAAGATCATCAGAGAAAACTTTGCAGATCGTACAATCATTAGCATTGCTCACAGGATACCTACAGTTATGGACTGTGATAGGGTTTTGGTCATAGATGAAGGATTTGCAAAGGAATATGACAAGCCATCACGTTTGCTTGAAAGGCATTCACTTTTTGCAGCATTGGTTAAGGAGTATTCTAATAGATCAGCTTAA 4497 0.3916 MSSSSSAWLTSPSCTLLPIHSSSSTPQFILQWLRFIFLSPCPQRLLLSALDSLFLLSLLAFSAQKLYSRFYSSSNSTSLITKPLLQKNDSDYRITFWFKLAFLLTTLLAISYTVLGILAFTQTNNLSSWKQIEALFRLFQAITNIVIVILMVHEIKLKASTHPLPLRIYWAANFVIASLFTASAIVRMITVGETKLELNLRIDDIFSLVNLPLSVFFFVISIKGSSGIHVIRISDVVATYPSVSTDRTLSPYACSSVLSKTVWYWMNPLLNKGYQTPLKLEDVPLLPLDFRAEKMSELFQNNWPKPEENSKHPVGVTLFRCFWKHIAFTGFLAIIKLCVMYVGPLLIESFVDFTSRKDGTSSEGIVLISILFAAKSLEVLSSHQFNFHSQKLGMLVRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVSAALFLLYSYVGVSVVASILGIAIVSFFTLYRTKSSNSFQFQIMRSRDSRLKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFLYYFAVNMGILGTASITVAVLTFGTATFIGTPLKAGTVFTITSIIKILQEPLRTFPQALINISQATISLGRLDEFMMSKEMDDSAVQRDESCGGDVAVEIKDGKFSWDDNDENEALTVEELVIKKGDHAAIVGTVGSGKSSLLASVLGEMFKISGKARVCGTTAYVAQTSWIQNATIKENILFGLPMNMEKYKEALRVCCLEKDLEMMEYGDETEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAQTGSFIFKECIMGTLKDKTVLLVTHQVDFLHNVDSIMVMREGRVVQSGKYDELLKAGLDFGALVAAHESSMEIAQTSDDSAQSPKLAHISSREKESAVEKKSSQDKSKSNKTAAKLIEDEERETGRVNLKVYKHYFTEAFGWWGIALMVAMSVACMLSTLVGDYWLATATADDSGIPSSTFITVYAVIAVVVCIVVMLRALLFTYWGLKTSQSFFVGMLQSILHAPMSFFDTTPSGRILSRVSTDILWVDIQIPMFVNFLTTTYLGLFSILIVTCQNSWETVFLLIPLFWLNNWYRKYYLATTRELTRLDSITKAPVIHHFSETISGVMTIRSLRKQNAFSQGNVDRVNASIRMDFHNIGANEWLGFRLDYTGVIFLCIATLFMIFLPSAIVRPEYVGMSLSYGLALSGLLSASIFMSCNVENKMVSVERIKQFTNLPSEAPWKIADKSLPHNWPSHGTIELNNLQVRYRPTTPLVLKGVSLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINISNVGLHDLRSRFGIIPQEPVLFQGTVRTNIDPLGLYSEEEIWKSLERCQLKEAVAAKPEKLDALVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVLQKIIRENFADRTIISIAHRIPTVMDCDRVLVIDEGFAKEYDKPSRLLERHSLFAALVKEYSNRSA* 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1312 1498 Gene3D ABC transporter type 1, transmembrane domain 316 624 IPR036640 GO:0005524|GO:0016021
Mtr2g1312 1498 Gene3D ABC transporter type 1, transmembrane domain 905 1239 IPR036640 GO:0005524|GO:0016021
Mtr2g1312 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1492 IPR003439 GO:0005524
Mtr2g1312 1498 MobiDBLite consensus disorder prediction 872 915 - -
Mtr2g1312 1498 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 61 1498 - -
Mtr2g1312 1498 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Mtr2g1312 1498 SUPERFAMILY ABC transporter transmembrane region 940 1240 IPR036640 GO:0005524|GO:0016021
Mtr2g1312 1498 SMART AAA_5 1284 1468 IPR003593 -
Mtr2g1312 1498 SMART AAA_5 668 849 IPR003593 -
Mtr2g1312 1498 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Mtr2g1312 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1221 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1312 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1312 1498 Pfam ABC transporter 664 792 IPR003439 GO:0005524
Mtr2g1312 1498 Pfam ABC transporter 1275 1423 IPR003439 GO:0005524
Mtr2g1312 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 864 IPR003439 GO:0005524
Mtr2g1312 1498 SUPERFAMILY ABC transporter transmembrane region 318 619 IPR036640 GO:0005524|GO:0016021
Mtr2g1312 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1247 1491 IPR027417 -
Mtr2g1312 1498 CDD ABC_6TM_ABCC_D2 939 1233 IPR044726 GO:0140359
Mtr2g1312 1498 Gene3D - 636 867 IPR027417 -
Mtr2g1312 1498 CDD ABCC_MRP_domain1 641 841 - -
Mtr2g1312 1498 Pfam ABC transporter transmembrane region 950 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1312 1498 Pfam ABC transporter transmembrane region 328 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1312 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 860 IPR027417 -
Mtr2g1312 1498 Gene3D - 1242 1492 IPR027417 -
Mtr2g1312 1498 MobiDBLite consensus disorder prediction 886 915 - -
Mtr2g1312 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 61 1498 - -
Mtr2g1312 1498 CDD ABCC_MRP_domain2 1256 1476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1312 Mtr-Chr2 14280838 14290214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1312 626 883 Calmodulin-binding Proteins AT2G36910 29.856 7.45e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1312 - K05665 gmx:100780167 2353.17