Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1308 ATGAAAGTTCTCATTTTTATCTTGGTTTTTGTACCATATTGTGCTCTTGCCTTTGATGTAAAAACAGTCATAGACTCTCCTATGTTAGCGCAAAAGGTAGGAACTAATCGCACTATTAAAGTTGATATTAATGGAAATGGAGACTTTACATCAGTACAAGCTGCCATAGATTCAATTCCTAAAGGAAATTCTAATTGGGTCATCGTTCATATTAGAAAAGGAGTACACGAGTATAAATTCGATTATTATTTGATTATCAAGTTAATTATATTAAGTCAAAAGAAGTTAATTATATGATTTATTTTAATCACGTGAAGAGAAAAAGTGCACATACCAAAGAATAAGCGTTATACATTCATGAGAGGAAATGGAAGAGGAAAAACTGCAATTGTTTGGTCCGAAAGCTCCTCTAACAACATAGCTTCTGCCACCTTCAAAGTTGAAGCCTTGGATTTCATTGCCTTTGGAATTAGCTTCAAGAATGATGCACCTACTGGGATAGCCTATACTTCACAAAATCAATATGTGGCAGCAGAAAAAGCAGCATTTTATCATTGTGCATTTTATAGTTCACACAACACGCTCTTTGATTACAAAGGAAGACATTACTACGAGTCTTGTTGTTACATTCAAGGTTCCATTGATTTCATATTTGGTCGTGGCAGAACCATCTTCCAAGTGAGTTCATTTTCTTATCTAAATTGTGAGATATTTGTGGTTGATGACAAAAGGATAAAAATCCGTGGGTCAATTACAGCTGCAAATAGAGAAAATGAAAGTGAGATGAGTGGATTTATATTTGTCAAAGGCAAAGTTTATGGCATTGGTGGTGTGTACTTAGGAAGGGCTAAAGGTCCTTATTCTAGGGTCATTTTTGCTAAGACATACCTCTTCAAAACCGTTGTTCCAGAAAGGATGGACCAATTGGAACATCTTTACCATGCGGAGTATAAATGTCATGGACCTGGAGCCACAACACAGGGAAGAGCTTCTTGGTCAAGGCAGCTTAGTGATGAAGAAGCTGCTCCATTTATATCTATTGATTACATTGATGGCAAGAATTGGTTACCAGCTTGGATATAA 1083 0.3601 MKVLIFILVFVPYCALAFDVKTVIDSPMLAQKVGTNRTIKVDINGNGDFTSVQAAIDSIPKGNSNWVIVHIRKGVHEYKFDYYLIIKLIILSQKKLII*FILIT*REKVHIPKNKRYTFMRGNGRGKTAIVWSESSSNNIASATFKVEALDFIAFGISFKNDAPTGIAYTSQNQYVAAEKAAFYHCAFYSSHNTLFDYKGRHYYESCCYIQGSIDFIFGRGRTIFQVSSFSYLNCEIFVVDDKRIKIRGSITAANRENESEMSGFIFVKGKVYGIGGVYLGRAKGPYSRVIFAKTYLFKTVVPERMDQLEHLYHAEYKCHGPGATTQGRASWSRQLSDEEAAPFISIDYIDGKNWLPAWI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1308 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 79 - -
Mtr2g1308 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 102 357 - -
Mtr2g1308 358 Gene3D - 33 357 IPR012334 -
Mtr2g1308 358 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Mtr2g1308 358 SUPERFAMILY Pectin lyase-like 35 356 IPR011050 -
Mtr2g1308 358 PANTHER PECTINESTERASE 67-RELATED 102 357 - -
Mtr2g1308 358 Pfam Pectinesterase 94 350 IPR000070 GO:0030599|GO:0042545
Mtr2g1308 358 PANTHER PECTINESTERASE 67-RELATED 4 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1308 Mtr-Chr2 14247334 14248743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1308 36 354 Carbohydrate Esterase AT5G47500 35.103 2.57e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1308 - - mtr:MTR_2g033970 563.918