Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1306 ATGGAAGGTAACAAAGACGAAGCATTGCGATGCATCCAAATCGCAGAAGAAGCAATCTCATCAGGTAACAAATCTCGCGCTCTCAAATTCATCAAGATCGCTCAGCGCCTCAACCGCGATCTACCTCTTGATTCCTTGTTAGCCAAATGCGAACGACTCAAATCACAGTCTTCTGCTTCTTCCACAAGAGGCTCTAACCCACCACCCTTGCCTAAGGTGCCTGCGAAGGAAAGGCCGGTAAGAATCATGAAAGAGAATGGTTTGAAAGGTGAAAAGAATTACATGGAAAAGAATGTTAATTTGATTAGAGAAATTTTATGGGAAGATGATTACTATATGATTTTAGGGTTAGAGAAGAGTTGTTCTATTGAAGAGATTAGAAAAGCTTATAAGAAATTATCTTTGAAAGTTCATCCTGATAAGAATAAAGCACCGGGTTCGGAAGACGCATTTAAGAAAGTTTCTAATGCTTTTCAGTGTTTGAGTGATGATGGTTCAAGAAAAGAGTATGATCGTGGTGTTTGGGTTAATGAAGATGATGATTTGAACTTTTATAATAAGAATCATAGTTATAAGAGAAATGAATGTGATCATGATGATTTGAATTATGATCAGAAGCATAGTTTTGGGAGGAGGGATGATACTTGCGAAGATGAATTTGATCCAGATGATGATATATTTAACTTTGAATTATGA 696 0.3693 MEGNKDEALRCIQIAEEAISSGNKSRALKFIKIAQRLNRDLPLDSLLAKCERLKSQSSASSTRGSNPPPLPKVPAKERPVRIMKENGLKGEKNYMEKNVNLIREILWEDDYYMILGLEKSCSIEEIRKAYKKLSLKVHPDKNKAPGSEDAFKKVSNAFQCLSDDGSRKEYDRGVWVNEDDDLNFYNKNHSYKRNECDHDDLNYDQKHSFGRRDDTCEDEFDPDDDIFNFEL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1306 231 PRINTS DnaJ domain signature 112 130 IPR001623 -
Mtr2g1306 231 PRINTS DnaJ domain signature 130 145 IPR001623 -
Mtr2g1306 231 PRINTS DnaJ domain signature 146 166 IPR001623 -
Mtr2g1306 231 CDD DnaJ 110 163 IPR001623 -
Mtr2g1306 231 SUPERFAMILY Chaperone J-domain 88 170 IPR036869 -
Mtr2g1306 231 PANTHER AT29763P-RELATED 1 223 - -
Mtr2g1306 231 MobiDBLite consensus disorder prediction 54 78 - -
Mtr2g1306 231 Gene3D DnaJ domain 107 225 IPR036869 -
Mtr2g1306 231 PANTHER CHAPERONE PROTEIN DNAJ 49 1 223 - -
Mtr2g1306 231 Pfam DnaJ domain 110 171 IPR001623 -
Mtr2g1306 231 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Mtr2g1306 231 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Mtr2g1306 231 SMART dnaj_3 109 166 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1306 Mtr-Chr2 14237652 14238770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1306 111 171 C2H2 Transcription Factor Family AT1G74250 40.299 2.14e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1306 K09518 - gmx:100820432 229.95