Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1299 ATGATGTTTCAGACGCACAACAAATCTTGGAACTCTCCAATGTTGAAATCCTTAAGCTTTAAACCCTTCTTTCACAGCCTAAATCCAATCACAACAGTGCCCATTTCAACCCCAAAATCCATTTCTTCTCTTTCAACCCTCTCATTGAACCACAACTCCTCAACCACTTCACAACAAACCCAATTCACAGTTTCATATCTCATTACCAATTTCGGTTTCTCATCAGAAACCGCTTCAAAAGCTTCAAAACTAGTTCAATTCGACACTTCCCGAAAACCCGATTCAGTTATCGCTGTTTTCAGAAACTACGGTTTCTCTGATTCTCAGATAAAAAACATCATTAGACAAGCACCCGACATTCTTAAATGTGACCCCTACAAAAGGGTTTTGCCAAAGTTTGAATTTTTAACCTCAAAAGGTGCTTCAAATATTGATATTGTGGAGATAGTTACAAGAAGCCCTAGAATTCTTGGTTCTAGTCTTGAGAATAGTATAATCCCTACATTTGAATCGGTAAGAATGTTCCTTCCTTCTAATGAGAAAGTTATTGAACGTATACTTCATTGTAAACATTTCTTTGGTCATTTTCATTTTATTAGAAATGTTAAGATGTTACTTGATGATGGAGTCATTCACTCAAATATCACTTTTTTATTGCTTAGAAGACCGTCTATATTATTGACTTACGATATGAGGAATGCTTTGGATTTGGTTAAGGAGATGGGGTTTGATGATCCTACCAATGTGAATTTTTGTCAAGCATTGTTAGCCAAAAGGGCCATGTCGAAATCTCGTTGGGATGCGAAAGTTGTTGTCTTTAAGAAATGGGGTTGGTCTGATGAAATGGTTCTTGAAGCGTTTAGGAAGCGACCATTGTGTATGTTAGCATCCACGGAGAAAATTAATAAAGTGATGAGATTTTGGGTCAATGAGTTGGGTTGGGATTCTTCGGCTCTTGTCAAAAGGCCGGAGGTTTTTTCATATAGTTTGGAGAATAGGATCGTTCCGAGGGCTTGTGTTGTTTCGTATTTGATCTCCAAAGGTTTGATTGAAAAGAATATTGAATTGTCTACTCCATTTGGTGTTAATGAAAATGTGTTTCTTGAAAAGTATGTGCAGTGTTTTAAGGAGGAAAGCGATGATTTGTTAAAGTTATACCTAGAAAAAATGGGTGTTTGA 1179 0.3673 MMFQTHNKSWNSPMLKSLSFKPFFHSLNPITTVPISTPKSISSLSTLSLNHNSSTTSQQTQFTVSYLITNFGFSSETASKASKLVQFDTSRKPDSVIAVFRNYGFSDSQIKNIIRQAPDILKCDPYKRVLPKFEFLTSKGASNIDIVEIVTRSPRILGSSLENSIIPTFESVRMFLPSNEKVIERILHCKHFFGHFHFIRNVKMLLDDGVIHSNITFLLLRRPSILLTYDMRNALDLVKEMGFDDPTNVNFCQALLAKRAMSKSRWDAKVVVFKKWGWSDEMVLEAFRKRPLCMLASTEKINKVMRFWVNELGWDSSALVKRPEVFSYSLENRIVPRACVVSYLISKGLIEKNIELSTPFGVNENVFLEKYVQCFKEESDDLLKLYLEKMGV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1299 392 Pfam mTERF 262 367 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 Pfam mTERF 98 245 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 PANTHER CGI-12 PROTEIN-RELATED 22 391 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 SMART mt_12 316 350 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 SMART mt_12 216 244 IPR003690 GO:0003690|GO:0006355
Mtr2g1299 392 Gene3D Transcription termination factor 3, mitochondrial 195 385 IPR038538 -
Mtr2g1299 392 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1299 Mtr-Chr2 14173116 14174839 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1299 mTERF 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1299 K15032 - gmx:102666739 376.711