Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1298 ATGTTCAAGTTCAATAGAAGAACCCTAATCTATTATATCAAGGGATTAACTTCCCCACAATCCCCAAACCCTAATCCTTTTCAACATTCCTCATTACCATTTTCTTTGCATTTCTGCACTAAAACTTCAGATTCACCTTCATTTGTTGTGTCCTATCTCATCCATAATTTTGGCTTCACCCCACAATTTGCTTCTAAACTCTTCTCCTCTTACAATGTTCGTTTCAACACTGCTCAAAAACCTGATTCTGTTCTCAGTTTCTTTAGAAGTCATGGTTTCTCTGACTCCCAATTATGTCATATGATTATCAAGGCACCATGGCTACTTTCCTGCGACCCCTCCAAAAGGGTGTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTCAGTAAGAGCCCTTTGGTTCTTGCTGGAAGCCTGGAAAATGTTTTAGTCCCAACGTACGAATTGGTTTATAGATTCTTGCAATCTCACCATGACACTATTGCTTGTGTAATTCGGAATTCACATCTCTTTCGACAGAGTAACGTGTCATCTAATATCAGATTGCTAATTGAGAATGGAGTGACCGACTCAAACATGGCAAGATTGCTTCGGGACTGGAGTCAGGTATTCCGGACAAGTGACATACCAATGTTGGTGGAGGAATTAAAGGATTTGAGGTTTAATCCTTCAAAAGCATCTTTTGTTATAGCGCTGCTTGCCAAAACAACTATAAACAAAACCCTATGGAAAGAGAAAGTCGACACCTTTAAGAAATGGGGCTGGTCTGATGAAGATATTGGTGAAGCATTTAGAAAGGATCCTCATTGTATGTTAGCATCCATTGATAAAATTAATTTACTGATGAACTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCATTGCCAAAGTGCCAAGGGTTATTAGTTGTAGTCTCCAGAAAACTATCATACCTAGGGCCTCAGTTGTGCAATATCTTCTAAAGAAAGGTTTGCGGAAAAAGAATGCAAGCTTAACTACTCCATTTGTAATGACTGATAAGTCGTTCCTTAACACATACATAATACGTTTTAAGGAGGAGTCATCTTATCTCTTAAAGCTCTATGAAGAAAAGCTGAATCTTGCACACACCAGGGACAAAATTGGCATGTCATGA 1170 0.3897 MFKFNRRTLIYYIKGLTSPQSPNPNPFQHSSLPFSLHFCTKTSDSPSFVVSYLIHNFGFTPQFASKLFSSYNVRFNTAQKPDSVLSFFRSHGFSDSQLCHMIIKAPWLLSCDPSKRVLPKFQFFLSKGASNSDIVNLVSKSPLVLAGSLENVLVPTYELVYRFLQSHHDTIACVIRNSHLFRQSNVSSNIRLLIENGVTDSNMARLLRDWSQVFRTSDIPMLVEELKDLRFNPSKASFVIALLAKTTINKTLWKEKVDTFKKWGWSDEDIGEAFRKDPHCMLASIDKINLLMNFWVNQLGWDAMAIAKVPRVISCSLQKTIIPRASVVQYLLKKGLRKKNASLTTPFVMTDKSFLNTYIIRFKEESSYLLKLYEEKLNLAHTRDKIGMS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1298 389 PANTHER CGI-12 PROTEIN-RELATED 14 381 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 Pfam mTERF 248 355 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 Pfam mTERF 85 214 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 381 - -
Mtr2g1298 389 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 SMART mt_12 171 199 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 SMART mt_12 204 232 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Mtr2g1298 389 Gene3D Transcription termination factor 3, mitochondrial 158 369 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1298 Mtr-Chr2 14162353 14168354 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1298 mTERF 4.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1298 K15032 - gmx:102663414 407.142