Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1297 ATGTTCAAGTTCTTCAATTCATGGCGCCACAGAAGAACCCTAATCAATTATCTCAAGGGATTCACTACCCCTCTAACATCACAATCCCTAAACCCTAACCCTCTTTTCCACCATTTCTGCACCAACACTTCAGATTCAACCTCTCTTGCAGTCTCCTACCTCATCAACAATTTTGGTTTTGACCCACAATCTGCTTCCAAACTCTGTTCCACCTACCATCTTCGTTTCAAGACCACCCAAAAACCTGAATCTTTTCTCACATTCTTTAGAAACTATGGATTCTCTAATTCCCAACTACGCCATATGATTGCCAAGATGCCAGAGCTGCTTACCTGCAAACCCTCCAAAACTGTGTTGCCAAAGTTTCAATTTTTCCTCTCCAGAGGCGCTTCTACCTCTGACATTGTTAACATTGTCACCAAGAGCCCTAGAGTCTTGTATGTAAGCCTCAACAATCAAATAGTCCCCGCCTATGAATTGGTGTACAGATTCTTGCAATCTGACAAGGAAATTTTGGAAAAGTTGAATTACAGTGCAAATTTACTTTGTGATTGTACTGTGCAAAATAACATCACAATGCTGATTGAGAATGGGGTGTCTGACTCAAACATTAAAACATTGCTGAGAGAACAGACTCGGATATTCAAGAGACGTGACATGCTCAAGTCGGTGAAGGAATTAAAGGATTTGGGGTTTAATCCTTCAAAAACAACTTTTGGTGTAGCATTGCATGCCAAAACAACTGTAAACAATACCCTGTGGAAAGAGAAAGTTGATGCTTTTAAGAAATGGGGTTGGTCTGAAGAAGATTCTCTTGAAGCATTTAGAAAGAAACCTTATTGTATGTTAACATCCATTGATAAAATACATTTAGTGATGAACTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCATTGCCAAAACACCTTATATTTTGTCATTAAGTTTGGAAAAAAGGATCATTCCGAGGGCCGCTGTTGTCCAATTTCTTCTCAACAAAGGTTTGACAGATAAGAATGCAAGCTTAACTTATCCATTTGTGGTGACTGATAAGTTGTTTCTTAATATGTTTATAAAACGTTTTGAGAATGAGGCTTCTTATCTTTTAAAGTTGTATGAGGAAAAATGCAATCTAGGATAG 1146 0.3857 MFKFFNSWRHRRTLINYLKGFTTPLTSQSLNPNPLFHHFCTNTSDSTSLAVSYLINNFGFDPQSASKLCSTYHLRFKTTQKPESFLTFFRNYGFSNSQLRHMIAKMPELLTCKPSKTVLPKFQFFLSRGASTSDIVNIVTKSPRVLYVSLNNQIVPAYELVYRFLQSDKEILEKLNYSANLLCDCTVQNNITMLIENGVSDSNIKTLLREQTRIFKRRDMLKSVKELKDLGFNPSKTTFGVALHAKTTVNNTLWKEKVDAFKKWGWSEEDSLEAFRKKPYCMLTSIDKIHLVMNFWVNQLGWDAMAIAKTPYILSLSLEKRIIPRAAVVQFLLNKGLTDKNASLTYPFVVTDKLFLNMFIKRFENEASYLLKLYEEKCNLG* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1297 381 Pfam mTERF 252 355 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 Pfam mTERF 86 233 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 37 379 - -
Mtr2g1297 381 Gene3D Transcription termination factor 3, mitochondrial 164 369 IPR038538 -
Mtr2g1297 381 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 SMART mt_12 136 172 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 SMART mt_12 205 233 IPR003690 GO:0003690|GO:0006355
Mtr2g1297 381 PANTHER CGI-12 PROTEIN-RELATED 37 379 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1297 Mtr-Chr2 14157848 14158993 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1297 mTERF 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1297 K15032 - gmx:102663414 362.459