Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1296 ATGTTCAACTTCAATTCATGGCGTCATAGAAGAACTCTAATCTATCATCTCAAAGGCTTCATTACCCCACAAACATCACAATCCCTAAACCCTAGCCCTCTTTTCCACCATTTCTGCACCAACCCTTCAGATTCAACCTCTTTTGCAGCCTCCTACCTCATTCACAATTTTGGGTTTGACCCACAATTTGCTTCCAAACTATGCTCCACTCATCGTCTTCGTTTCAATTCCACCCAAAAACCTGAATCTGTTGTCACCTTCTTTAGAAACTATGGTTTTTCAGATTCCCAACTACGTGATCTGATTGCTAAGATGCCAGGGCTTCTTTCCTGCAAACCCTTCAAAACGGTGTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTGTGTAAGAACCCTGTGTTCCTTACTGCTAGTTTGGACAAAAAAATAGTCCAAACCTATGAATTGGTGTGCAGATTCTTGCAATCTGACAAGGAAACTTTGGCATTGTTGAACTACAATGCAAATTTACTTTGTGATCCTTATGTGCGAAATAACATCACAATGCTGATTGAGAAATGGAGTGTCCCACTCAAACATGAAAAAATTGGTTAG 624 0.399 MFNFNSWRHRRTLIYHLKGFITPQTSQSLNPSPLFHHFCTNPSDSTSFAASYLIHNFGFDPQFASKLCSTHRLRFNSTQKPESVVTFFRNYGFSDSQLRDLIAKMPGLLSCKPFKTVLPKFQFFLSKGASNSDIVNLVCKNPVFLTASLDKKIVQTYELVCRFLQSDKETLALLNYNANLLCDPYVRNNITMLIEKWSVPLKHEKIG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1296 207 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 195 - -
Mtr2g1296 207 Pfam mTERF 86 194 IPR003690 GO:0003690|GO:0006355
Mtr2g1296 207 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Mtr2g1296 207 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Mtr2g1296 207 PANTHER CGI-12 PROTEIN-RELATED 36 195 IPR003690 GO:0003690|GO:0006355
Mtr2g1296 207 Gene3D Transcription termination factor 3, mitochondrial 52 203 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1296 Mtr-Chr2 14149889 14150512 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1296 mTERF 1.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1296 K15032 - gmx:102666855 152.525