Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1285 ATGGAAGTAAAATACGATGAACCCATACCCAAATTCCCCAGAGATCAAAACCCTCCCAACGATTTTGACCCAAAAGGTTACAATCTCAACGGCAAAATCATGCTCTGTGCCATTATCCTTCTCTTCTTCATCATAGTATTAATGCTTTGTCTCCATATTTACGCTCGTTGGTACCTTCTCCAATCTCGTCGCCGGAGAAACCGTATACGCCGCCGTACTCAGCTGGTTTTCTTCACCGATGACCCAACAAACGCCGCCGTCACCACTGTTACACGCGGACTCGATGCTACCGTCATCGCCTCGCTTCCGTTGTTCTTTTACGATGCGAAGAATTACCCGGAAAACGCACCGGAATGTGCTGTTTGTTTGTCGGAATTTGAATCCGGTGAAACGGGTCGGGTTTTACCCAAATGCAAACATAGTTTTCATACTGAGTGTATTGATATGTGGTTTCATTCTCATGACACGTGTCCTCTTTGTCGGGCGCCCGTTGAGCCCATGCAAAACCGACCTGATGTTGTTATAAACGTTTGCGAACCGGAAACCGGTTCAAGTTCTGGTTCGACCGAAGATGTGAATAATGAAAACCGAGCCGGTAAAGAGGTTGGTTCGAGTTCGGTTGGGTTAAGGAGAAAGCCGTCATTTGCGGGAGTGACAGTTGAAGTGCCTACAAGAAACGAAAGTTTTCGAGATGAGTCGACTCAGTCATCGTCGTTCCGGTCGCCGATGAGTAGAATGTCCTCGTTTAAGAGGATTCTTAGTATGAATTGGAAAGGGAATGTTTCTCCGTCATGCGACGGTTGTGGTGGTGGTGGGTGTAGCTCAATAGCCGAAGCTTCGAATTACAGTCAAAATAAAGCTGTCTAG 867 0.4683 MEVKYDEPIPKFPRDQNPPNDFDPKGYNLNGKIMLCAIILLFFIIVLMLCLHIYARWYLLQSRRRRNRIRRRTQLVFFTDDPTNAAVTTVTRGLDATVIASLPLFFYDAKNYPENAPECAVCLSEFESGETGRVLPKCKHSFHTECIDMWFHSHDTCPLCRAPVEPMQNRPDVVINVCEPETGSSSGSTEDVNNENRAGKEVGSSSVGLRRKPSFAGVTVEVPTRNESFRDESTQSSSFRSPMSRMSSFKRILSMNWKGNVSPSCDGCGGGGCSSIAEASNYSQNKAV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1285 288 Pfam Ring finger domain 118 161 IPR001841 -
Mtr2g1285 288 SMART ring_2 119 160 IPR001841 -
Mtr2g1285 288 SUPERFAMILY RING/U-box 101 169 - -
Mtr2g1285 288 MobiDBLite consensus disorder prediction 1 21 - -
Mtr2g1285 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 170 IPR013083 -
Mtr2g1285 288 PANTHER RING-H2 FINGER PROTEIN ATL64 25 209 - -
Mtr2g1285 288 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Mtr2g1285 288 MobiDBLite consensus disorder prediction 178 208 - -
Mtr2g1285 288 MobiDBLite consensus disorder prediction 179 201 - -
Mtr2g1285 288 CDD RING-H2_EL5_like 118 161 - -
Mtr2g1285 288 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 25 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1285 Mtr-Chr2 14004685 14006017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1285 7 263 Rapid Response to Elicitors AT3G16720 47.857 4.29e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1285 - - lja:Lj6g3v1468220.1 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4399 4 57999064 58000504 Mtr2g1285 2 14004685 14006017 PCT