LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g1283	ATGGGAGGAAATGACAATAATGGTGGCCAAGGCCAAGGGAAAAAGTATGCACTTCTTGGTGTATCTTGCATACTTCTTGTGGCTATGGTGGGCGCCGTCGCAGTTAGTTTAACAAAAGGTGACGACAAAGAACAAACAGCACAAATCTCAAACTCACAAAAAAATGTTGATATGCTATGTCAATCAACAGAATACAAAGAAACATGTCACAAAAGTCTTGAAAACGCGTCATCAACCGACACGAAAGAGCTTATCAAAGCAGCTTTCAGTGCAACAGCAGAGGAATTACGGAAACACATAAACAATTCAGCACTTTATCAAGAATTGGGAAAAGACAGCATGACAAAACAAGCAATGGAAATTTGCAACGAAGTTTTGGATTATGCCGTTGATGGAATTCATAAATCTGTTGGTACATTGGACCAATTTGATTTCCATAAGCTAAGTGAATATGCTTTTGATATCAAGGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTAGATGGTTTTGTAAATACAACAACAAAAGCTGGTGAAACAATGACTAAGGTTTTGAAAACTTCTATGGAATTAAGTAGTAATGCCATTGACATGATGGATGTTGTTTCGCACTTCTTTAAGGGTTTCGATCCATCCCAATATGGTGTTAGTAGGAGGCTTTTATCTGATGATGGTATTCCTTCATGGGTTAGTGACGGGCATAGACATCTTCTTGCTGGTGGAAATGTTAAAGCTGATGCTGTTGTGGCTCAAGATGGGAGTGGACAGTTTAAGACATTAACTGATGCTCTTAAGACTGTTCCTCCTCAAAATGCAGTACCTTTTGTGATCCATGTTAAGGCTGGTGTTTATAAAGAGACTGTTAATGTTGCTAAGGAAATGAATTATGTTACTGTCATTGGCGATGGTCCTACCAAGACCAAATTCACTGGTAGCCTCAACTATGCTGATGGTATCAACACTTACAATACTGCAACTTTCGGTGTTAATGGTGCAAACTTCATGGCAAAGGATATTGGCTTCGAGAACACAGCAGGAACGAATAAACATCAAGCAGTTGCCCTCCGAGTAACAGCAGATCAAGCAATATTCCACAACTGTCAAATGGACGGTTTCCAAGACACACTCTACGTCCAATCCCAACGTCAATTCTACCGTGACTGCGCCATCTCTGGCACAATTGACTTTGTTTTTGGTGACGCCTTCGGAGTTTTCCAAAATTGCAAACTAATTTGTAGAGTGCCAGCAAAAGGCCAACAATGTCTAGTAACCGCAGGTGGACGAGAAAAACAAAACAGCGCAAGTGCTCTAGTTTTCCAAAGTTCTCACTTCACAGGTGAACCAGCACTAACATCGGTAACACCCAAAGTATCTTACCTAGGAAGACCATGGAAGCTGTATTCCAAAGTTGTCATAATGGACTCAACCATTGATGCTATTTTCGTCCCTGAAGGTTACATGGCATGGATGGGAAGTGCTTTTAAGGATACATGTACTTATTATGAGTACAATAATAAAGGTCCTGGTGCTGACACAAATTTAAGAGTTAAATGGCATGGTGTTAAGGTTTTAACTTCAAATGTAGCAGCTGAATATTACCCTGGTAAATTCTTTGAGATTGTTAATGCAACTGCACGTGATACTTGGATTGTGAAGTCTGGTGTTCCTTATTCACTTGGACCTATGTAA	1698	0.3987	MGGNDNNGGQGQGKKYALLGVSCILLVAMVGAVAVSLTKGDDKEQTAQISNSQKNVDMLCQSTEYKETCHKSLENASSTDTKELIKAAFSATAEELRKHINNSALYQELGKDSMTKQAMEICNEVLDYAVDGIHKSVGTLDQFDFHKLSEYAFDIKVWLTGTLSHQQTCLDGFVNTTTKAGETMTKVLKTSMELSSNAIDMMDVVSHFFKGFDPSQYGVSRRLLSDDGIPSWVSDGHRHLLAGGNVKADAVVAQDGSGQFKTLTDALKTVPPQNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTNKHQAVALRVTADQAIFHNCQMDGFQDTLYVQSQRQFYRDCAISGTIDFVFGDAFGVFQNCKLICRVPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKVSYLGRPWKLYSKVVIMDSTIDAIFVPEGYMAWMGSAFKDTCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLGPM*	566

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr2g1283	565	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	45	202	IPR006501	GO:0004857
Mtr2g1283	565	Gene3D	-	246	564	IPR012334	-
Mtr2g1283	565	ProSitePatterns	Pectinesterase signature 1.	274	293	IPR018040	-
Mtr2g1283	565	PANTHER	PECTINESTERASE	11	564	-	-
Mtr2g1283	565	PANTHER	PECTINESTERASE	11	564	-	-
Mtr2g1283	565	Pfam	Plant invertase/pectin methylesterase inhibitor	56	201	IPR006501	GO:0004857
Mtr2g1283	565	Pfam	Pectinesterase	249	540	IPR000070	GO:0030599\|GO:0042545
Mtr2g1283	565	SUPERFAMILY	Pectin lyase-like	246	561	IPR011050	-
Mtr2g1283	565	CDD	PMEI-like_3	59	203	-	-
Mtr2g1283	565	ProSitePatterns	Pectinesterase signature 2.	393	402	IPR033131	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g1283	Mtr-Chr2	13988474	13990579	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g1283	9	560	Carbohydrate Esterase	AT5G49180	45.263	4.91e-172	498

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g1283	K01051		-	gmx:100784682	779.63

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr2g1283	2	13988474	13990579	Mtr2g1283	2	13988474	13990579	ECH

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