Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1283 ATGGGAGGAAATGACAATAATGGTGGCCAAGGCCAAGGGAAAAAGTATGCACTTCTTGGTGTATCTTGCATACTTCTTGTGGCTATGGTGGGCGCCGTCGCAGTTAGTTTAACAAAAGGTGACGACAAAGAACAAACAGCACAAATCTCAAACTCACAAAAAAATGTTGATATGCTATGTCAATCAACAGAATACAAAGAAACATGTCACAAAAGTCTTGAAAACGCGTCATCAACCGACACGAAAGAGCTTATCAAAGCAGCTTTCAGTGCAACAGCAGAGGAATTACGGAAACACATAAACAATTCAGCACTTTATCAAGAATTGGGAAAAGACAGCATGACAAAACAAGCAATGGAAATTTGCAACGAAGTTTTGGATTATGCCGTTGATGGAATTCATAAATCTGTTGGTACATTGGACCAATTTGATTTCCATAAGCTAAGTGAATATGCTTTTGATATCAAGGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTAGATGGTTTTGTAAATACAACAACAAAAGCTGGTGAAACAATGACTAAGGTTTTGAAAACTTCTATGGAATTAAGTAGTAATGCCATTGACATGATGGATGTTGTTTCGCACTTCTTTAAGGGTTTCGATCCATCCCAATATGGTGTTAGTAGGAGGCTTTTATCTGATGATGGTATTCCTTCATGGGTTAGTGACGGGCATAGACATCTTCTTGCTGGTGGAAATGTTAAAGCTGATGCTGTTGTGGCTCAAGATGGGAGTGGACAGTTTAAGACATTAACTGATGCTCTTAAGACTGTTCCTCCTCAAAATGCAGTACCTTTTGTGATCCATGTTAAGGCTGGTGTTTATAAAGAGACTGTTAATGTTGCTAAGGAAATGAATTATGTTACTGTCATTGGCGATGGTCCTACCAAGACCAAATTCACTGGTAGCCTCAACTATGCTGATGGTATCAACACTTACAATACTGCAACTTTCGGTGTTAATGGTGCAAACTTCATGGCAAAGGATATTGGCTTCGAGAACACAGCAGGAACGAATAAACATCAAGCAGTTGCCCTCCGAGTAACAGCAGATCAAGCAATATTCCACAACTGTCAAATGGACGGTTTCCAAGACACACTCTACGTCCAATCCCAACGTCAATTCTACCGTGACTGCGCCATCTCTGGCACAATTGACTTTGTTTTTGGTGACGCCTTCGGAGTTTTCCAAAATTGCAAACTAATTTGTAGAGTGCCAGCAAAAGGCCAACAATGTCTAGTAACCGCAGGTGGACGAGAAAAACAAAACAGCGCAAGTGCTCTAGTTTTCCAAAGTTCTCACTTCACAGGTGAACCAGCACTAACATCGGTAACACCCAAAGTATCTTACCTAGGAAGACCATGGAAGCTGTATTCCAAAGTTGTCATAATGGACTCAACCATTGATGCTATTTTCGTCCCTGAAGGTTACATGGCATGGATGGGAAGTGCTTTTAAGGATACATGTACTTATTATGAGTACAATAATAAAGGTCCTGGTGCTGACACAAATTTAAGAGTTAAATGGCATGGTGTTAAGGTTTTAACTTCAAATGTAGCAGCTGAATATTACCCTGGTAAATTCTTTGAGATTGTTAATGCAACTGCACGTGATACTTGGATTGTGAAGTCTGGTGTTCCTTATTCACTTGGACCTATGTAA 1698 0.3987 MGGNDNNGGQGQGKKYALLGVSCILLVAMVGAVAVSLTKGDDKEQTAQISNSQKNVDMLCQSTEYKETCHKSLENASSTDTKELIKAAFSATAEELRKHINNSALYQELGKDSMTKQAMEICNEVLDYAVDGIHKSVGTLDQFDFHKLSEYAFDIKVWLTGTLSHQQTCLDGFVNTTTKAGETMTKVLKTSMELSSNAIDMMDVVSHFFKGFDPSQYGVSRRLLSDDGIPSWVSDGHRHLLAGGNVKADAVVAQDGSGQFKTLTDALKTVPPQNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTNKHQAVALRVTADQAIFHNCQMDGFQDTLYVQSQRQFYRDCAISGTIDFVFGDAFGVFQNCKLICRVPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKVSYLGRPWKLYSKVVIMDSTIDAIFVPEGYMAWMGSAFKDTCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLGPM* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1283 565 TIGRFAM PME_inhib: pectinesterase inhibitor domain 45 202 IPR006501 GO:0004857
Mtr2g1283 565 Gene3D - 246 564 IPR012334 -
Mtr2g1283 565 ProSitePatterns Pectinesterase signature 1. 274 293 IPR018040 -
Mtr2g1283 565 PANTHER PECTINESTERASE 11 564 - -
Mtr2g1283 565 PANTHER PECTINESTERASE 11 564 - -
Mtr2g1283 565 Pfam Plant invertase/pectin methylesterase inhibitor 56 201 IPR006501 GO:0004857
Mtr2g1283 565 Pfam Pectinesterase 249 540 IPR000070 GO:0030599|GO:0042545
Mtr2g1283 565 SUPERFAMILY Pectin lyase-like 246 561 IPR011050 -
Mtr2g1283 565 CDD PMEI-like_3 59 203 - -
Mtr2g1283 565 ProSitePatterns Pectinesterase signature 2. 393 402 IPR033131 -
Mtr2g1283 565 SMART PMEI_2 51 201 IPR006501 GO:0004857
Mtr2g1283 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 205 IPR035513 -
Mtr2g1283 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1283 Mtr-Chr2 13988474 13990579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1283 9 560 Carbohydrate Esterase AT5G49180 45.263 4.91e-172 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1283 K01051 - gmx:100784682 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1283 2 13988474 13990579 Mtr2g1283 2 13988474 13990579 ECH