Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1282 ATGGAAATTTGCAATGAAGTTTTGGATTATGCTGTTGATGGAATTCATAAATCTGTTGGTACATTGGACCAATTTGATTTCCATAAGCTAAGTGAATATGCTTTTGATATCAAGGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTAGATGGTTTTGTAAATACAAAAACACATGCTGGTGAAACAATGGCTAAGGTTTTGAAAACTTCTATGGAATTAAGTAGTAATGCCATTGACATGATGGATGTTGTTTCGCGCATACTTAAGGGTTTCCATCCATCCCAATATGGTGTTAGTAGGAGGCTTTTATCTGATGATGGTATTCCTTCATGGGTTAGTGACGGGCATAGACATCTTCTTGCTGGTGGAAATGTTAAAGCTAATGCTGTTGTGGCTCAAGATGGGAGTGGACAGTTTAAGACATTAACTGATGCTCTTAAGACTGTTCCTCCTACAAATGCAGCACCTTTTGTGATCTATGTTAAGGCTGGTGTATATAAAGAGACTGTTAATGTTGCTAAGGAAATGAATTATGTTACTGTCATTGGCGATGGTCCTACCAAGACCAAATTCACTGGTAGCCTCAACTATGCTGATGGTATCAACACTTACAAAACTGCAACTTTCGGTGTTAATGGTGCAAACTTCATGGCAAAGGATATTGGCTTCGAGAACACAGCAGGAACCAGTAAATTTCAAGCAGTTGCCCTCCGAGTAACAGCAGATCAAGCAATATTCCACAACTGTCAAATGGACGGTTTCCAAGACACACTCTTCGTCGAATCCCAACGCCAATTCTACCGTGACTGCGCCATCTCTGGCACAATCGACTTTGTTTTTGGCGACGCCTTTGGAGTTTTCCAAAATTGCAAACTAATTTGTAGAGTGCCAGCAAAAGGCCAAAAATGTCTAGTAACCGCAGGTGGACGAGATAAACAAAACAGTGCAAGTGCTCTCGTTTTCCTAAGTTCTCACTTCACAGGTGAACCAGCGCTAACATCGGTAACACCCAAATTATCTTACCTAGGAAGACCATGGAAGCTATATTCCAAAGTTGTCATAATGGACTCAACCATTGATGCTATGTTTGCCCCTGAAGGTTACATGCCAATGGTGGGAGGTGCTTTTAAGGATACATGTACTTTTTATGAGTACAATAATAAAGGTCCTGGTGCTGACACAAATTTAAGAGTTAAATGGCATGGTGTTAAGGTTTTAACTTCAAATGTAGCAGCTGAATATTACCCTGGTAAATTCTTTGAGATTGTTAATGCAACTGCACGTGATACTTGGATTGTGAAGTCTGGTGTTCCTTATTCACTTGGACCTATGTAA 1344 0.3988 MEICNEVLDYAVDGIHKSVGTLDQFDFHKLSEYAFDIKVWLTGTLSHQQTCLDGFVNTKTHAGETMAKVLKTSMELSSNAIDMMDVVSRILKGFHPSQYGVSRRLLSDDGIPSWVSDGHRHLLAGGNVKANAVVAQDGSGQFKTLTDALKTVPPTNAAPFVIYVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYKTATFGVNGANFMAKDIGFENTAGTSKFQAVALRVTADQAIFHNCQMDGFQDTLFVESQRQFYRDCAISGTIDFVFGDAFGVFQNCKLICRVPAKGQKCLVTAGGRDKQNSASALVFLSSHFTGEPALTSVTPKLSYLGRPWKLYSKVVIMDSTIDAMFAPEGYMPMVGGAFKDTCTFYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLGPM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1282 447 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 88 IPR035513 -
Mtr2g1282 447 ProSitePatterns Pectinesterase signature 2. 275 284 IPR033131 -
Mtr2g1282 447 PANTHER PECTINESTERASE 1 446 - -
Mtr2g1282 447 CDD PMEI-like_3 1 89 - -
Mtr2g1282 447 ProSitePatterns Pectinesterase signature 1. 156 175 IPR018040 -
Mtr2g1282 447 Gene3D - 128 446 IPR012334 -
Mtr2g1282 447 PANTHER PECTINESTERASE 1 446 - -
Mtr2g1282 447 Pfam Plant invertase/pectin methylesterase inhibitor 2 83 IPR006501 GO:0004857
Mtr2g1282 447 Pfam Pectinesterase 131 422 IPR000070 GO:0030599|GO:0042545
Mtr2g1282 447 SUPERFAMILY Pectin lyase-like 128 443 IPR011050 -
Mtr2g1282 447 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 87 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1282 Mtr-Chr2 13978738 13980397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1282 1 442 Carbohydrate Esterase AT5G49180 47.682 8.33e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1282 K01051 - gmx:100784682 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4400 4 58002393 58004264 Mtr2g1282 2 13978738 13980397 PCT