Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1281 ATGGAAGTTTGCAATGAAGTTTTGGATTATGCTGTTGATGGAATTCATAAATCTGTTGGTGCAGTGGATAAATTTGATATTAATAAGATACATGAATATTCTTATGATCTCAAAGTTTGGTTAACCGGTACACTTTCTCATCAACAAACATGTTTGGATGGTTTTGCAAATACAACAACAAAAGCCGGTGAAACAATGGCTAGGGCTTTGAACACGTCTATCCAATTAAGCAGTAATGCTATTGACATGGTTGATGCTGTTTATGATTTAACTAATGCTAAAAGGAGGCTTTTGTCACTTGATAATGGTTATCCTTTATGGGTTAGCGAAGGGCAAAGACGACTTCTTGCTGAAGCAACTGTTAAACCTAATGTTGTTGTGGCTCAAGATGGAAGTGGACAGTTTAAGACATTAACTGATGCTATTAAGACTGTTCCTGCCAATAATGCACAGAATTTTGTGATTTATGTTAAGGAAGGTGTTTATAATGAGACTGTTAATGTGCCTAAGGATATGGCTTTTGTTACCATCATTGGTGATGGTCCTGCAAAGACCAAATTCACTGGTAGCCTCAATTATGCGGATGGTCTCCTACCTTACAACACTGCAACCTTCGGTGTTAATGGTGAAAACTTCATGGCAAAGGATATCAGCATCGAAAACACAGCAGGACCAGAGAAACATCAAGCAGTTGCACTCCGAGTAACAGCAGACAAAGCAATCTTCTACAACTGCCAAATAGATGGTTACCAAGCAACACTCTTCGCCGAATCCCAACGTCAATTCTACCGTGACTGCAGCATCTCTGGCACAATCGACATGATCTACGGTGACGCCTTTGCAGTTTTCCAAAACTGCAAACTAATCGTAAGAAAACCATTAGAAGAACAACAATGTTTCGTAGCTGCCGATGGAAGAACCAAATCTGACAGCTCAAGTGGCTTTGTTTTCCAAAGTTGTCATTTCACAGGTGAACCAGAAGTAGCAAAGATAGACCCCAAAATAGCTTACCTAGGAAGACCATGGAAGTCATATTCCAAAGTTGTTATTATGGATTCAAACATCGATGACATTTTTGATCCTGAAGGTTACATGCCATGGATGGGAAGTGCTTTTAAAGATACATGTACATTTTATGAGTACAATAATAAAGGTCCTGGTGCTGACACATCAAAAAGAGTTAAATGGCCTGGTGTTAAGAGTATATCTTCAACTGAAGCAGCTGCTTTTTATCCCGGTAAATTCTTTGAGATTGCGAATGCAACCGATCGTGATACTTGGATTGTGAAGTCTGGAGTTCCTTATTCACTTGCTGCTTTGGATGCTACAAGTAACCAAGGGGCTACTCCAGGTCAGGGAACTGTAACTGGAACTGGAGCTGGAGCTGAAGGTCCAGCTCCAGCTGAAGGTCCAGCTTCAGCTGGAAAGAGCAGTGGTTTAGTTAACAAAGGTAAAGTTAAGGATAATACTCATAACTTCGGTCAATAA 1488 0.4012 MEVCNEVLDYAVDGIHKSVGAVDKFDINKIHEYSYDLKVWLTGTLSHQQTCLDGFANTTTKAGETMARALNTSIQLSSNAIDMVDAVYDLTNAKRRLLSLDNGYPLWVSEGQRRLLAEATVKPNVVVAQDGSGQFKTLTDAIKTVPANNAQNFVIYVKEGVYNETVNVPKDMAFVTIIGDGPAKTKFTGSLNYADGLLPYNTATFGVNGENFMAKDISIENTAGPEKHQAVALRVTADKAIFYNCQIDGYQATLFAESQRQFYRDCSISGTIDMIYGDAFAVFQNCKLIVRKPLEEQQCFVAADGRTKSDSSSGFVFQSCHFTGEPEVAKIDPKIAYLGRPWKSYSKVVIMDSNIDDIFDPEGYMPWMGSAFKDTCTFYEYNNKGPGADTSKRVKWPGVKSISSTEAAAFYPGKFFEIANATDRDTWIVKSGVPYSLAALDATSNQGATPGQGTVTGTGAGAEGPAPAEGPASAGKSSGLVNKGKVKDNTHNFGQ* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1281 495 CDD PMEI-like_3 1 86 - -
Mtr2g1281 495 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 87 IPR035513 -
Mtr2g1281 495 Pfam Plant invertase/pectin methylesterase inhibitor 2 83 IPR006501 GO:0004857
Mtr2g1281 495 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 87 IPR035513 -
Mtr2g1281 495 PANTHER PECTINESTERASE 1 442 - -
Mtr2g1281 495 PANTHER PECTINESTERASE 1 442 - -
Mtr2g1281 495 Gene3D - 121 441 IPR012334 -
Mtr2g1281 495 ProSitePatterns Pectinesterase signature 1. 149 168 IPR018040 -
Mtr2g1281 495 Pfam Pectinesterase 124 416 IPR000070 GO:0030599|GO:0042545
Mtr2g1281 495 SUPERFAMILY Pectin lyase-like 120 436 IPR011050 -
Mtr2g1281 495 MobiDBLite consensus disorder prediction 444 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1281 Mtr-Chr2 13971188 13973398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1281 1 435 Carbohydrate Esterase AT5G49180 47.672 1.90e-156 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1281 K01051 - gmx:100784682 641.343