Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1278 ATGTGTGGAGGTGCTATCATTTCTGATTTCATTGGTGTGAAACGTGACCGTGACCTATGGTTTGAGCTTGATCCTTCTGTTGATCTACTTGGTCTTGGTGGTGCTGCTGCTGCTGCTGCTTTTAACACCCCCTCTTCCAAAGAGCTACCACCTCTTAGCTTTGAGAAATTCTTCTCATCAGACAATAAAGTGGTCTCATGTGACAATGTTGAGAAGAAACAAAGCTTGGTAACTGTGGAGAAAGGTAAGAAAAGCACCGGAGGCAAAAGAGCCCGTAAGAATGTTTACAGAGGAATCAGGCAGAGGCCATGGGGCAAATGGGCTGCAGAAATAAGGGACCCACAACAAGGTGTTCGTGTTTGGCTAGGTACTTTCTCAACAGCTGAAGAAGCAGCTAGAGCCTACGACACCGCGGCCAAGCGCATTCGCGGCGACAAGGCTAAGCTCAATTTCCCTGACACTCCTGCTGTTACCGCTCCTCCAGCAAAGAAGCAGTGTGTTAGCTCTGATCAAGCCAGTTCCCAAGCTAGCTCTGAGTCAGCTGGGTCTGGGTTTGAGCTTGATGAGGAAATGGAAATCAAGCAGAAAATGTCGGACCTTGAATGGATCCTTGGCTTGGATAGTGACATTCCTCAGGCCCAAGCCCCAACCCAAGTTGAAGCTCAGCCCGAGCCGGAGCCTGTGCCTTTCACCATGCCTGCTGATTGGGACAGCAGCTTCATGGACTTTTGGACTTCTGAAGACATGGTTGATCCCATCCGTCACCTGTTTTATAACTAA 780 0.491 MCGGAIISDFIGVKRDRDLWFELDPSVDLLGLGGAAAAAAFNTPSSKELPPLSFEKFFSSDNKVVSCDNVEKKQSLVTVEKGKKSTGGKRARKNVYRGIRQRPWGKWAAEIRDPQQGVRVWLGTFSTAEEAARAYDTAAKRIRGDKAKLNFPDTPAVTAPPAKKQCVSSDQASSQASSESAGSGFELDEEMEIKQKMSDLEWILGLDSDIPQAQAPTQVEAQPEPEPVPFTMPADWDSSFMDFWTSEDMVDPIRHLFYN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1278 259 PANTHER EREBP TRANSCRIPTION FACTOR 1 192 - -
Mtr2g1278 259 MobiDBLite consensus disorder prediction 151 186 - -
Mtr2g1278 259 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Mtr2g1278 259 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Mtr2g1278 259 MobiDBLite consensus disorder prediction 214 233 - -
Mtr2g1278 259 PANTHER DNA-BINDING DOMAIN 1 192 IPR044808 GO:0003700|GO:0009873
Mtr2g1278 259 Gene3D AP2/ERF domain 95 153 IPR036955 GO:0003700|GO:0006355
Mtr2g1278 259 CDD AP2 96 154 IPR001471 GO:0003700|GO:0006355
Mtr2g1278 259 SUPERFAMILY DNA-binding domain 95 153 IPR016177 GO:0003677
Mtr2g1278 259 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Mtr2g1278 259 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Mtr2g1278 259 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Mtr2g1278 259 MobiDBLite consensus disorder prediction 164 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1278 Mtr-Chr2 13869066 13871423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1278 1 220 AP2-EREBP Transcription Factor Family AT3G16770 41.379 4.91e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr2g1278 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1278 K09286 - gmx:100817253 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1278 2 13869066 13871423 Mtr2g1278 2 13869066 13871423 ECH