Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1277 ATGATGACGACGGAGAAGTTAATGTCCACCGGCGGTCCCCGCTACGTTCAAATGAGATCGTCTCCGCCATCGTCTCCTGCTCCTCCTCCCACGGCGTCAGAGATTATGTCACTTCCGTCTTTTCGTCACTCCGGTGGCGAGGTTTGTCGGATTTTCGATGAATTGCCAAAAGCTACAATCGTTTCCGTTTCTCGTCCTGATGCTAGTGATATTAGCCCTATGCAACTTTCTTATACGATTCAGGTTCAGTATAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTCATCAAGTATTTATTTTGCATTTTGCATTAAAAAAGCGTGCCTTTATTGAGGAAATTCACGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACACTACTATGGAGCAAGTTGAGGATGAAGGTGACGATGATACAGTTCCTTTACAAACTGATGAAAGTGTTAGAAACAGAGATGTTCCATCTAGTGCTGCTCTGCCAATTATACGGCCAGCTTTAGGAAGACAACATTCTATTGCAGACAGGGCAAAAACTGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATTAGTATTGTTAACTCTCCTGAGGTTTGCAAGTTTTTGGAGGTGTCAATGTTATCTTTTTCACCTGAATATGGCCCTAAGCTGAAGGAAGAATCTGTGATGGTGAAGCATCTGGCTAAAATTATAAAGGATGATGACTCCAGAAAGTGTTGTTCCAACTGCTTTAACTTTTGTAATGACAATTGGCAAAAGGTGTGGGCCGTACTGAAACCTGGATTCTTGGCATTGCTGGCACATCCTTTTGCTACGCAGCCTTTAGACATTATTGTTTTTGATGTACTGCCCGCCTTAGATGCCAATGGGAATGGCCGTTTATCGTTAGCAGTTGAAATGAAGGAACGAAATCCTTTACGCCATTCGTTTAAGGTGACTTGCGGAATCCGAAGTATTAGAATTAGAGCTAAAAGTAGTAATAAAGTGAAAGATTGGGTCACTGCAATTAATGATGTTGGAGTAAGACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTAGTTGAAGATGACAGTCAAGCCCAGTGGTTTGTAGATGGGCAAGCAGCATTTGAGGTCATGGCTTCTTCAATTGAGGATGCCAAATCTGAGATATTTATCTGTGGGTGGTGGTTGTGCCCAGAACTCTATCTACGGCGACCTTTCCAGACTCATGCTTCATCAAGACTTGATAATCTGTTGGAAGCAAAAGCTAAGGAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTGTTGATAATCATATTTGCTTCATTGGAGGACTGGATTTATGCTTTGGTCGATACGACTCGCCTGAGCATAAAGTGGGAGATGTCCCTCCGCAAATTTGGCCTGGAAAGGACTATTACAACCCAAGGGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGACACTTTGTTCAACGATGGAATTATGCCAAGAGGAACAAAGCTCCGTATGAACAAACAATACCATTACTTATGCCTCAACATCATATGGTTATTCCTCATTACTTGGGAAGCAGTGAGATACCGATTGAAACTAAGAACACTGTCAATGATAGAGGCTTCAAGAGAGAAGATTCATTTTCCTCATCTTCCCAAGATCAAGATATTCCTCTACTCTTACCTCAAGAGCCGGGTGGGTTGGATTCTCCTACAGCAGATCGGAAACCAAATGGGCTAAGCTCCTTCCTACATCATGCTGACAAGTCAAGAAGGATCAGCAGTGGCCTTCCTTTCTCATTCCGAAGGACCAAAGTAGCAGCAGTTGGTCCGGATACACCAATGAAAGGCTTTGTAGATGATCTTGACTCTGAGCAGTATCACGAGAAAATGCCTCATGATAGAGTGGCTCATGCCGATTCACAAAATACAGATCTTGAATGGTGGGATACACAAGAGCGGGCTGATCAGGGAGGTTTTGCTGATGAATCCGGACAAATTGGTCCTCGTGCTTCGTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAGTGGTCGGCTGGAACAAGTCAAACTGAAGAAAGCATCCACAATGCTTATTGTTCTCTTATTGAGAAAGCTGAACACTTCATCTACATTGAGAACCAGTTTTTTATATCAGGTCTGGCTGGAGATGATATGATACGTAATCGTGTGTCACAAGCTTTATATCGGCGGATTATGCGAGCTCATAATGACAAAAAAACTTTCAGAGTTATAGTCGTCATACCGCTCCTGCCTGGCTTCCAGGGAGGGCTTGATGATGCTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGCAGAATTCTATCTTACATAATCTTAATGACCTTCTTGGTTCAAAAATACATGACTACATCTCTTTTTATGGCCTGAGGAATTATGGTAGACTTTCTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTACGTTCACAGTAAAATCATGATTATTGATGATTGTATAACTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGGGACTCTGAGATTGGTGTAGTTATAGAAGACAAAGAGTTGATTGATTCTTATATGGATGGAAAGCCTTGGAAGGCAGGGAAATTTTCTTCGAGTCTCCGATTATCATTATGGTCTGAACACTTGGGTCTCCCGGCCGGAGAGGTCAATCAAATAATGGACCCTGTTGTTGATTCTACATACAAGGATATTTGGATGACAATAGCAAAGACAAATACAGCGATTTATCAGGATGTCTTTTCCTGTGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAATGTATGGCTTTATGGAAAGAGAAAATTGGACACACGACCATTGATTTAGGAATAGCCCCAGAAAAACTAGAATCCTATCACAATGGAGATATCAAGAACACTCCTCCCATGGAGAGATTAGCATTAGTAAAGGGTCATCTTGTTTCTTTTCCCTTGGAGTTCATGAGTCAAGAAAGTCTAAGACCTACCTTTAATGAAGGCGAATACTATGCCGCTCAAGTTTTCCATTGA 3363 0.4234 MMTTEKLMSTGGPRYVQMRSSPPSSPAPPPTASEIMSLPSFRHSGGEVCRIFDELPKATIVSVSRPDASDISPMQLSYTIQVQYKQFKWELVKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTMEQVEDEGDDDTVPLQTDESVRNRDVPSSAALPIIRPALGRQHSIADRAKTAMQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEESVMVKHLAKIIKDDDSRKCCSNCFNFCNDNWQKVWAVLKPGFLALLAHPFATQPLDIIVFDVLPALDANGNGRLSLAVEMKERNPLRHSFKVTCGIRSIRIRAKSSNKVKDWVTAINDVGVRPPEGWCHPHRYGSFAPPRGLVEDDSQAQWFVDGQAAFEVMASSIEDAKSEIFICGWWLCPELYLRRPFQTHASSRLDNLLEAKAKEGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSPEHKVGDVPPQIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQTIPLLMPQHHMVIPHYLGSSEIPIETKNTVNDRGFKREDSFSSSSQDQDIPLLLPQEPGGLDSPTADRKPNGLSSFLHHADKSRRISSGLPFSFRRTKVAAVGPDTPMKGFVDDLDSEQYHEKMPHDRVAHADSQNTDLEWWDTQERADQGGFADESGQIGPRASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEHFIYIENQFFISGLAGDDMIRNRVSQALYRRIMRAHNDKKTFRVIVVIPLLPGFQGGLDDAGAASVRAIMHWQYRTICRGQNSILHNLNDLLGSKIHDYISFYGLRNYGRLSDGGPVATSQVYVHSKIMIIDDCITLIGSANINDRSLLGSRDSEIGVVIEDKELIDSYMDGKPWKAGKFSSSLRLSLWSEHLGLPAGEVNQIMDPVVDSTYKDIWMTIAKTNTAIYQDVFSCVPNDLIHTRLAFRQCMALWKEKIGHTTIDLGIAPEKLESYHNGDIKNTPPMERLALVKGHLVSFPLEFMSQESLRPTFNEGEYYAAQVFH* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1277 1120 Gene3D - 246 350 IPR011993 -
Mtr2g1277 1120 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 485 512 IPR001736 GO:0003824
Mtr2g1277 1120 CDD PH_PLD 202 348 - -
Mtr2g1277 1120 Pfam PLD-like domain 790 966 IPR025202 -
Mtr2g1277 1120 SUPERFAMILY Phospholipase D/nuclease 736 991 - -
Mtr2g1277 1120 SUPERFAMILY Phospholipase D/nuclease 336 605 - -
Mtr2g1277 1120 Coils Coil 107 127 - -
Mtr2g1277 1120 Gene3D Endonuclease Chain A 739 980 - -
Mtr2g1277 1120 PANTHER PHOSPHOLIPASE 43 1117 - -
Mtr2g1277 1120 Pfam Phospholipase D Active site motif 485 512 IPR001736 GO:0003824
Mtr2g1277 1120 SUPERFAMILY PH domain-like 256 348 - -
Mtr2g1277 1120 PANTHER PHOSPHOLIPASE D 43 1117 IPR015679 -
Mtr2g1277 1120 SMART pld_4 917 944 IPR001736 GO:0003824
Mtr2g1277 1120 SMART pld_4 485 512 IPR001736 GO:0003824
Mtr2g1277 1120 MobiDBLite consensus disorder prediction 138 157 - -
Mtr2g1277 1120 PIRSF PLD_euk 55 618 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mtr2g1277 1120 PIRSF PLD_euk 611 1120 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mtr2g1277 1120 Gene3D Endonuclease Chain A 370 608 - -
Mtr2g1277 1120 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 917 944 IPR001736 GO:0003824
Mtr2g1277 1120 CDD PLDc_vPLD1_2_yPLD_like_2 777 961 - -
Mtr2g1277 1120 MobiDBLite consensus disorder prediction 1 34 - -
Mtr2g1277 1120 MobiDBLite consensus disorder prediction 631 677 - -
Mtr2g1277 1120 CDD PLDc_vPLD1_2_yPLD_like_1 378 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1277 Mtr-Chr2 13840461 13858977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1277 2 1001 Phospholipase D Gene Family (Wang group) AT3G16785 71.500 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1277 K01115 - gmx:100780514 1961.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1277 2 13840461 13858977 Mtr2g1277 2 13840461 13858977 ECH