Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1276 ATGGTTTCTATTCCATCTCTTGTCAATTTTATTTCAAGAACTATGTCTTCGAATAAAGATAAGAGTTATGGAAAGGATGATGATGCAAGGAAAGTTGTGGAAGCAATGGCAAAGGAAGCAAAGAAGAATGAAATGTTGTTGAGTTCATCTGGAATTGTAAAGTCTGACAAGTCCAACAATTTTTCCTGTGTGTTCACTAAAAAGGGTCAGAAAGGATTCAATCAGGATTGTCTTATTGTTTGGGAGGAATTTGGATGCCAAGAAGACATTATTTTGTGTGGAGTTTTCGATGGACATGGACCTTGGGGACACTTTGTATCTAAAAGGGTCCGAAAAATGTTACCAAAATTTTTGCTCTTCAATTGGCAGGAAAATCTGGCTGAAAAATCACTTGACCTGAGTTTTAAGATGGAAACAGACATGAATCTCCATGAGTATGATATATGGAAGCAGTCGTACATAAAGACTTTTGCGGCAATTGATCAGGATCTAAAGCGGCATACTGGAATTGATTCATTTCAAAGTGGAACTACAGCTTTGACAGTTATCAAACAGGGTGAATATCTCATTATAGCAAATGTTGGTGATTCTAGAGCTGTCTTAGCAACTACTTCAGAGAATGGCACATTGACTCCTATTCAGCTTACCACTGACTTGAAGCCAAATTTACCAAATGAAGCAGAGCGCATAATGGAATCAAACGGAAGAGTGTTTTGTATGGAAGATGAACCAGGAGTATATAGAGTTTGGATGCCAAATGGTAAGAGTCCAGGACTAGCAATATCAAGAGCATTTGGTGATTATTGTGTAAAAGACTTTGGACTAATCTCAGTACCAGATGTGACACAAAGAAAACTCACTACTATGGATCAATTTGTCATCTTAGCAACAGATGGGGTATGGGATGTTATTTCCAACCAAGTAGCTGTGAAAATTGTTGCTTCAACACCAAATAGAGAAAAAGCAGCTGATAGGCTAGTGAAATGTGCAAGACATGAATGGATAAGTATTTCTCTAGCTTTAGGAGAGGCTGTTTATAAACTACACTTGATTGTGATTTTATGTCTTAGAACACTTTTGAAGAGCGAATATATATGCTTTTATAGCAAAATGTATGAACTTGTACCAGTTACTTGGCACCACATGAATGAAGGTTGA 1158 0.3713 MVSIPSLVNFISRTMSSNKDKSYGKDDDARKVVEAMAKEAKKNEMLLSSSGIVKSDKSNNFSCVFTKKGQKGFNQDCLIVWEEFGCQEDIILCGVFDGHGPWGHFVSKRVRKMLPKFLLFNWQENLAEKSLDLSFKMETDMNLHEYDIWKQSYIKTFAAIDQDLKRHTGIDSFQSGTTALTVIKQGEYLIIANVGDSRAVLATTSENGTLTPIQLTTDLKPNLPNEAERIMESNGRVFCMEDEPGVYRVWMPNGKSPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTMDQFVILATDGVWDVISNQVAVKIVASTPNREKAADRLVKCARHEWISISLALGEAVYKLHLIVILCLRTLLKSEYICFYSKMYELVPVTWHHMNEG* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1276 385 CDD PP2Cc 60 334 IPR001932 -
Mtr2g1276 385 SMART PP2C_4 52 340 IPR001932 -
Mtr2g1276 385 Pfam Protein phosphatase 2C 73 330 IPR001932 -
Mtr2g1276 385 Gene3D - 48 343 IPR036457 -
Mtr2g1276 385 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Mtr2g1276 385 ProSiteProfiles PPM-type phosphatase domain profile. 61 344 IPR001932 -
Mtr2g1276 385 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 357 - -
Mtr2g1276 385 SUPERFAMILY PP2C-like 59 332 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1276 Mtr-Chr2 13831979 13836286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1276 1 334 PP2C-type Phosphatase Gene Family AT3G05640 57.313 1.41e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1276 - - gmx:100817397 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1276 2 13831979 13836286 Mtr2g1276 2 13831979 13836286 ECH