Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g1248 | ATGAAACTCAACAACAACAACAACAAAATTTCCATGTCAACCTCAACTTCACCATCAAACTCCGGCAACCTTGTCTCCGACCAGTTTCCGGCGGGTCTCCGTGTACTTGTTGTCGATGATGACCCTACTTGCCTCATGATCCTTGAAAGAATGCTCCGTTTTTGCCTCTATGAAGTTACCAAATGTAAGAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAATAAAAATGGGTTCGACATTGTTTTAAGCGATGTGCATATGCCGGATATGGATGGATTCAAACTTTTGGAACATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGAAAAAACGTGGTAATGAAAGGTGTGACACATGGTGCTTGTGATTATCTAATCAAGCCTGTGCGAATTGAGGCTTTGAAGAATATATGGCAGCATGTGGTTAGGAAGAGAAAGAATAGCTGGAAAGATCTGAGGCAATCTGGTGGATTAGATGAAAGAGATCGAGAAAAAAAGGCATCCACTGATGCTAATTACTCATCTTCAACGAATGAAGGCAAGAGCTCAAAGAAGAGGAGGGATGAAGAAGATGAAGCAGATGATAGGGATGATTGTTCGACGTCAAAGAAGCCGCGAGTTGTTTGGTCTATTGAGCTTCATCAGCAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGCTGTTCCGAAAAAGATTATGGAAATGATGAATGTTCCTGGGCTCACTAGAGAAAACGTTGCCAGTCATCTTCAGAAATACCGTTTGTATCTTCGAAGGTTGAGTGGAGTTTCCCAGCAGCAAAGTAACTTGAATAACTCCTTCATGAGTGCGCAAGAGTCAATATTTGGAGGAACCTCTGTAAATGAAATTGATCTTCAAACCCTTTCAGCTTCTGGCCAGTTCTCGGCGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTTACAGTCCTGAGAACTCAAAACTAAGATTTGGAGATGGGCAACTGCAACATATGAGCAGCAGTAAACCGGTGAACTTTCTTCACGGAATCCCTATCAACATTGAGCCGAAGCAGTTTGCCAATTTTCACCAGTCTGCTCAATCCTTTGGCAGCGCAAATATGCGAGTCAATGCTTCTGCTGCAAAGAGAAGCCCCTGGTTGACGCAGATGGCTCAGTCTCAACCAAGAGGTCAGGTGCTAAATGAGAATACAAATTCTCATGCTACAATGTTTCCATCATCTTTAATGCAACCTACAGGACCAAATGGAATATCAGTCAATAGTTTCCCTCTTAGATGCACTTCAGGTATATCCAGTAGCAGTACAAAAGGTGCATTTCATGCGGAAGCTACTTCGGGAATTAAAGGATTAGGGGGATTTAGTTATGATGTTTATAATGAACTCCATCGGAAGTCCAATGATTGGGGATTAGCAAATACAGGCCTGACATATGATGGTTCTCAACATTCAAATACTTTACAAGGCAACATTGATGTCTCGCCGTCGATTTTAGGCCATCGTGGTTTTTCCTCTATCCAACAGACTCGACAAAATAGAGATGGTATGAGTCAAGGTGATCACCAAAATGTTGGTCAACACCTCAATACACCTTTTGTTGATAATTCATTAAGGGGTAAGAGTGAAAGAATTCCGGGTACAAACATCGAGATTAACCCCTTCTCTGATCAAAGTCAAGAGGATCTCATGAGTGTGTTTCTGAACCAGCACAAAGGCATTGGACAAGTTGATAATGAGTTTGACTTTGATGGATATTCCATAGACAACATTCCAGTTTATAACAGATCCTGTTAG | 1821 | 0.4179 | MKLNNNNNKISMSTSTSPSNSGNLVSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKKRRDEEDEADDRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEIDLQTLSASGQFSAQSLAKLQAAGLYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPINIEPKQFANFHQSAQSFGSANMRVNASAAKRSPWLTQMAQSQPRGQVLNENTNSHATMFPSSLMQPTGPNGISVNSFPLRCTSGISSSSTKGAFHAEATSGIKGLGGFSYDVYNELHRKSNDWGLANTGLTYDGSQHSNTLQGNIDVSPSILGHRGFSSIQQTRQNRDGMSQGDHQNVGQHLNTPFVDNSLRGKSERIPGTNIEINPFSDQSQEDLMSVFLNQHKGIGQVDNEFDFDGYSIDNIPVYNRSC* | 607 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g1248 | 606 | CDD | REC_typeB_ARR-like | 35 | 149 | - | - | |
Mtr2g1248 | 606 | Gene3D | - | 207 | 270 | - | - | |
Mtr2g1248 | 606 | MobiDBLite | consensus disorder prediction | 516 | 563 | - | - | |
Mtr2g1248 | 606 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 429 | 568 | IPR045279 | GO:0009736 | |
Mtr2g1248 | 606 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 15 | 283 | IPR045279 | GO:0009736 | |
Mtr2g1248 | 606 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 308 | 428 | IPR045279 | GO:0009736 | |
Mtr2g1248 | 606 | Pfam | Myb-like DNA-binding domain | 213 | 263 | IPR001005 | - | |
Mtr2g1248 | 606 | ProSiteProfiles | Response regulatory domain profile. | 34 | 149 | IPR001789 | GO:0000160 | |
Mtr2g1248 | 606 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 208 | 267 | IPR017930 | - | |
Mtr2g1248 | 606 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Mtr2g1248 | 606 | PIRSF | RR_ARR_type-B | 9 | 593 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Mtr2g1248 | 606 | Gene3D | - | 33 | 165 | - | - | |
Mtr2g1248 | 606 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 211 | 264 | IPR006447 | GO:0003677 | |
Mtr2g1248 | 606 | MobiDBLite | consensus disorder prediction | 187 | 208 | - | - | |
Mtr2g1248 | 606 | SMART | REC_2 | 33 | 145 | IPR001789 | GO:0000160 | |
Mtr2g1248 | 606 | MobiDBLite | consensus disorder prediction | 159 | 176 | - | - | |
Mtr2g1248 | 606 | MobiDBLite | consensus disorder prediction | 159 | 208 | - | - | |
Mtr2g1248 | 606 | SUPERFAMILY | Homeodomain-like | 208 | 268 | IPR009057 | - | |
Mtr2g1248 | 606 | Pfam | Response regulator receiver domain | 35 | 143 | IPR001789 | GO:0000160 | |
Mtr2g1248 | 606 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 308 | 428 | - | - | |
Mtr2g1248 | 606 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 429 | 568 | - | - | |
Mtr2g1248 | 606 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 15 | 283 | - | - | |
Mtr2g1248 | 606 | MobiDBLite | consensus disorder prediction | 516 | 545 | - | - | |
Mtr2g1248 | 606 | SUPERFAMILY | CheY-like | 32 | 159 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g1248 | Mtr-Chr2 | 13500134 | 13503551 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g1248 | 67 | 601 | Response Regulator Gene Family | AT3G16857 | 44.654 | 2.35e-145 | 432 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-ARR-B | Mtr2g1248 | Response_reg | 4e-22 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g1248 | - | K14491 | mtr:MTR_2g034960 | 1192.56 |