Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1247 ATGGCTTTGAACTTTTGTAGCCACCGGTGCTTCTTCTTCATTGCCGCAGTCTTATCGGTCTTCGCCACAACGCTGTCAATGTCTCAGCAGCAAGCATCTGATTCGTGCAACGGAATATTCCTGTCATACACCTACAACGGCGGCATAAAACTACAGCCAAACTTGACGGACTCGGCTGCCCAACCGTCCCGATTTGAGTCGACACTAACAGTGCTCAACAATGGACTTGTGGAGCTGAAATCTTGGAAGGTGTTCGTTGGATTTCGTCACAGAGAATGGTTGGTGTCTGCATCCAATGCAGTGCTTGCTGATGGGACTAGTATCCCTGGTGCCGTTGGGAATGGCACCGTTATTGCAGGATCATCGGTGATCGATTTGAAGACTGCAGCAGCGACTGCAGGAGACTTGACACAGATGCAGGTTAAGGTAGATATGGTGGGGACGGTGGTAGGGGTTGTGCCACCCAGCGTGCCAATGCCTTCTATCATAAACCTTGCTAATGATGGTTTCATATGTGGTGAAGCCATTTCTCAAGGGAACAATGAAACTCATGTATGTTGCACAAGTGATCCCAATTACAAGACAAATATCACAACAAATGAAAAATTTCTACCTAGACAAAATGGAGATCTTACCATAATGTATGATGTGATCAAAGCATACAATTCCAATTATTGGGCAGAGGTCACAATTTCAAATCACAACCCTCTAGGCCGTCTTGACAATTGGAAATTAAGCTGGAATTGGACCAATGATGAATTTATCCACACAATGAAAGGTGCTTATCCATCAAATATAGATTCATCTAACTGTATTTTTGGTTCACAAGGTGAATTTTACAAGGAACTTGACTTTTCCAATGTATTGAATTGTGAAAAAAGACCAACAATAATTGATCTACCACCAACAAGGTTCAATGATACACAACTTGGTAAAGTACCATTTTGTTGTAGGAATGGTACTCTATTACCACCTTATATGGACCTCACCATGTCAATTTCAAGGTTTCAAATACAAGTTTATAAAATGCCACCACATCTCAACCGGTCAAGCCTTACACCACCACAAAATTGGGAGATTAAAGGTGATACAATCAACCCCGATTACAAATGTGGGGCGCCGATTAGGATTAGTCCTAGTCAATCTCAAGATCTTACAGGGTTACCTTCAAACATATCTTCAATTGCAAGTTGGCAAGTTGTGTGCAACATAAGTACAAAGTCATCATCAAAAAGTGATTCTCCTAAATGTTGTGTCTCATTTTCAGCTTATTATAATGAATCAGTTATTCCTTGTAGCACATGTGCATGTGGATGTCCTAGTAATCAAGAAAGAACATGTAGTGCTACTACACCAGCTATGTGGCTTCCATCAAAAGCACTTCTTGTTCCATTTGAGAATAGAAATGAATTTGCACATGAGTGGGCTAGTTTGAAAAACCTACAAGTACCTAACCCTACTCCATGTGGTGATAACTGTGGTGTGAGCATAAACTGGCATGTAAATTCAGATTATGAAAAAGGTTGGACTGCAAGGATCACAATTTTTAACTGGGGTGAGACGAATTACGCTGATTGGTTTGCTGCGGTTCAAATGGACAAAGGTGCAATAGGTTTTGAGGAAATGTATTCATTCAATGGAAGCTTGTTAGAGAGATTAAACACTACAATATTCATGCAAGGTAAGAAAGGATTGAACTTTCTTGTAGCGGAAGCAAATGGGTCAAACCCTCGAAGAGATCCGAGGGTGCCTGGGAAACAACAGTCAGTAATCTCGTTTAGAAAGAAAAATAAAGATGAAATCAATGTTGTTGGTGGTGATGGTTTTCCTAGTAAAGTGTTCTTTAATGGGGAGGAATGCTCTCTTCCTTCGGTGTTTCCAAGCAATGGTTTGAGAAATGAATTTTCCTTGGCTACTATTATGATCCTAATATTGTTGTCAAGTATGTTGATTCAATATTGA 1962 0.4052 MALNFCSHRCFFFIAAVLSVFATTLSMSQQQASDSCNGIFLSYTYNGGIKLQPNLTDSAAQPSRFESTLTVLNNGLVELKSWKVFVGFRHREWLVSASNAVLADGTSIPGAVGNGTVIAGSSVIDLKTAAATAGDLTQMQVKVDMVGTVVGVVPPSVPMPSIINLANDGFICGEAISQGNNETHVCCTSDPNYKTNITTNEKFLPRQNGDLTIMYDVIKAYNSNYWAEVTISNHNPLGRLDNWKLSWNWTNDEFIHTMKGAYPSNIDSSNCIFGSQGEFYKELDFSNVLNCEKRPTIIDLPPTRFNDTQLGKVPFCCRNGTLLPPYMDLTMSISRFQIQVYKMPPHLNRSSLTPPQNWEIKGDTINPDYKCGAPIRISPSQSQDLTGLPSNISSIASWQVVCNISTKSSSKSDSPKCCVSFSAYYNESVIPCSTCACGCPSNQERTCSATTPAMWLPSKALLVPFENRNEFAHEWASLKNLQVPNPTPCGDNCGVSINWHVNSDYEKGWTARITIFNWGETNYADWFAAVQMDKGAIGFEEMYSFNGSLLERLNTTIFMQGKKGLNFLVAEANGSNPRRDPRVPGKQQSVISFRKKNKDEINVVGGDGFPSKVFFNGEECSLPSVFPSNGLRNEFSLATIMILILLSSMLIQY* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1247 653 PANTHER COBRA-LIKE PROTEIN 7 1 653 - -
Mtr2g1247 653 PANTHER COBRA-LIKE PROTEIN 7 1 653 - -
Mtr2g1247 653 Pfam COBRA-like protein 225 405 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1247 Mtr-Chr2 13497538 13500176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1247 36 627 COBRA Gene Family AT4G16120 63.025 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1247 - - mtr:MTR_2g034950 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1247 2 13497538 13500176 Mtr2g1247 2 13497538 13500176 ECH
Mtr4g4426 4 58252181 58257359 Mtr2g1247 2 13497538 13500176 PCT