Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1240 ATGTCAGAAGGAGCCAGTTTTGTGTTAGAATCATCCGAAAATGGCACAGATTTGTCTCAGGATGACATTGGCACTGTCGAGGAAACACCAGAAGAAACAATTCTGTCAAGACAAACTTCTGTTAACCTTGTTCCTTTTATTGGTCAAAGATTTGTCTCTCAAGAAGCTGCTTATGAATTTTACTGCAGTTTTGCTAAACAATTTGGCTTTTCTATTCGACGACACCGCACCCGAGGGAAAGATGGGGTTGGCCGCGGAGTTACAAGGAGGGATTTTACTTGCCATCGCGGCGGATTTCCCCAAAATAAACCTTCTGAAGATGGGGGAGGGGGAAAGGCGCAAAGGAACCGTAAATCATCTCGCTGTGGTTGTCAAGCATACATGCGTATTGTGAAAAAGGCTGATTTTGATGTCCCTGAATGGCGTGTTACTGGTTTTAGAAACATCCACAATCATGAGTTGTTAAAATCCAATGAGGTGCGTCTTATTCAATCACACTGTCCGATATCTCCTGATGATAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCGGTAAGGCAAATGTTAAGATTAATGGAGCTAGAAAAAGGCGTCAAACTTGGTTGTCTTCCTTTTACAGAGATAGATGTGAGAAACTTGTTGCAGTCTTTTAGAAATGTGGATAAAGATAATGATGCTATTGATCTGATTGCAATGTGTAAGAGATTAAAAGATGAAAATCACAACTTCAGGTATGAATTCAAGATAGATAATAATAACAGGCTTGAGTACATTGCATGGTCCTACGGGTCATCAATTCAATCATACGAGGTATTTGGTGATGCTGTGGTTTTTGACACAACCTACCGAGTAGAGGCCTATGACATGGTGTTGGGAATTTGGCTTGGATTGGACAATAATGGAGTGATATGTTGCTTTAGTTGCGCCCTTCTACGGGATGAAAGTATGCCGTCTTTTTCATGGGCTTTAAAGGCTTTCTTGGGCTTTATGAAAGGAAAGGCTCCCCAAACATTACTGACTGATCATAACACATGGCTGAAAGAAGCTATTGCTGTTGAAATGCCTGAAAGTAAACATGCCTTTTGTATATGGCATATTCTCTCCAAGTTCTCTGACTGGTTTTATTTACTTCTTGGGTCGCAATATGATGAGTGGAAAGCTGAGTTCCATCGGCTCTACAATTTGGAAATGGTGGAAGATTTTGAAGAAAGCTGGAGGCAAATGGTGGATAAATATGGACTTCATGCAAATAAACATATCATTAGCCTATACTCATTAAGGACATTCTGGGCATTACCATTCTTGAGGCGATATTTCTTTGCAGGATTAACCAGTACATGTCAGACCGAGTCCATTAACGTTTTCATCCAACGGTTCTTGAGTGCACAATCTCAACCAGAACGTTTTTTAGAGCAAGTTGCTGATATTGTTGATTTTAATGACCGAGCCGGAGCAAAACAAAAGATGCAAAGGAAAATGCAGAAAGTGTGCTTGAAAACAGGTTCACCTATAGAATCCCATGCTGCCACTATACTTACTCCTTATGCCTTGAGCAAACTCCAGGAAGAGCTAGTTGCAGCACCTCAATATGCATCCTTTCTAGTTGATGAAGGTTGTTTTCAGGTTAGACACCATTCTCAGACCGATGGAGGTTGCAAAGTGTTTTGGCTTCCTTGTCAGGATCACATCAGCTGCAGCTGCCGTCTATTTGAGTTTTCAGGCATCTTATGTAAACATGTGTTACGCGTCATGTCAACTAATAACTGTTTTCACATCCCGGATCAATATTTACCGATCCGATGGCGAAACATTGGTTTGTCTTCTTTTAACCATTTTCATGGTGCAACTAGCAGGGATCAGCCTGAAAGGATACAATATTTGGAATCTTTGGTTTCAACACTTCTAATGGAATCCGTTGAAACCGAGGAACGCCTTGATGTTGCTTGTGACCAAGTTTCAATGGTGCTATCACGTGTTAAAACTCTTCCCAGGTCATCACATGGCGTAAATGATATTGCATTTAGTTATGCATCGGATTCGTTGATCCTGCCAGAGGTAGAAGATACTGATGAAATGATTCAGGGTTTTACAATTGCAAATCCTCATGATTCCATGGCTTTAGGCAAGCTAAAGGAGAGAAGGGCAAGAGATGGAGTTGATCTCAGTAGAAAACGTAGGCAGTTCTCAGCACCATTATGTGCACAATATGGACATGATGGATCTGATTGCTCAATAATGGCTGATGATAATATGAGCGAAGATGCATTAGGGTATATGTAG 2286 0.4099 MSEGASFVLESSENGTDLSQDDIGTVEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQFGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGFPQNKPSEDGGGGKAQRNRKSSRCGCQAYMRIVKKADFDVPEWRVTGFRNIHNHELLKSNEVRLIQSHCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRNVDKDNDAIDLIAMCKRLKDENHNFRYEFKIDNNNRLEYIAWSYGSSIQSYEVFGDAVVFDTTYRVEAYDMVLGIWLGLDNNGVICCFSCALLRDESMPSFSWALKAFLGFMKGKAPQTLLTDHNTWLKEAIAVEMPESKHAFCIWHILSKFSDWFYLLLGSQYDEWKAEFHRLYNLEMVEDFEESWRQMVDKYGLHANKHIISLYSLRTFWALPFLRRYFFAGLTSTCQTESINVFIQRFLSAQSQPERFLEQVADIVDFNDRAGAKQKMQRKMQKVCLKTGSPIESHAATILTPYALSKLQEELVAAPQYASFLVDEGCFQVRHHSQTDGGCKVFWLPCQDHISCSCRLFEFSGILCKHVLRVMSTNNCFHIPDQYLPIRWRNIGLSSFNHFHGATSRDQPERIQYLESLVSTLLMESVETEERLDVACDQVSMVLSRVKTLPRSSHGVNDIAFSYASDSLILPEVEDTDEMIQGFTIANPHDSMALGKLKERRARDGVDLSRKRRQFSAPLCAQYGHDGSDCSIMADDNMSEDALGYM* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1240 761 Pfam FAR1 DNA-binding domain 59 155 IPR004330 -
Mtr2g1240 761 ProSiteProfiles Zinc finger SWIM-type profile. 542 590 IPR007527 GO:0008270
Mtr2g1240 761 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 8 741 - -
Mtr2g1240 761 SMART 26again6 565 592 IPR006564 GO:0008270
Mtr2g1240 761 MobiDBLite consensus disorder prediction 1 22 - -
Mtr2g1240 761 Pfam MULE transposase domain 278 370 IPR018289 -
Mtr2g1240 761 Pfam SWIM zinc finger 564 587 IPR007527 GO:0008270
Mtr2g1240 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 741 IPR031052 GO:0006355
Mtr2g1240 761 MobiDBLite consensus disorder prediction 79 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1240 Mtr-Chr2 13451581 13457035 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g1240 FAR1 7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1240 - - gmx:100778434 1393.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1240 2 13451581 13457035 Mtr2g1240 2 13451581 13457035 ECH