Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1239 ATGAGTAGTAGTTCATCTAAAAACCCTATGCACAATAGTGAGGAGAAACCTTCCTCTTCTCCCTCATCACCAGTAAAGCTATTTGGTTTCTCATTAACACCATCTAACACTCTTCCTTCTAACAACAAGAGATTCATATGCCACTTCTGTCATCGCGAATTTACCAATTGTCAAGCGTTAGGAGGCCATCAAAACGCACACAAGAGAGAACGCCAAAGAGCACATTTTCTTTCCATTCTTCCACATCATCAACACTTTGTACCATCTTCACCATATCATCCTATGATAGCACAACATGGTGCACCAAGAGTAGTGTTACTTTGTCCACCTGGGTCACCATGGGAGACACAACCTTATGAAGAGGGTCCTAATGAGGTTCATTTTGATGCAGCTACATCCAGAAATAATGGGGCTTCCATGCAAGTAGACAATAATATTATTGATGGTGATGTTGATCTTAATTTGAGCCTAGCTTGTGCACCTTTAAATTCTAAGGGCAAATAG 504 0.4067 MSSSSSKNPMHNSEEKPSSSPSSPVKLFGFSLTPSNTLPSNNKRFICHFCHREFTNCQALGGHQNAHKRERQRAHFLSILPHHQHFVPSSPYHPMIAQHGAPRVVLLCPPGSPWETQPYEEGPNEVHFDAATSRNNGASMQVDNNIIDGDVDLNLSLACAPLNSKGK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1239 167 MobiDBLite consensus disorder prediction 1 24 - -
Mtr2g1239 167 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Mtr2g1239 167 PANTHER ZINC FINGER PROTEIN 5 12 159 IPR044299 GO:0010090
Mtr2g1239 167 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Mtr2g1239 167 SUPERFAMILY beta-beta-alpha zinc fingers 41 72 IPR036236 -
Mtr2g1239 167 PANTHER ZINC FINGER PROTEIN 8-LIKE 12 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1239 Mtr-Chr2 13439699 13440202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1239 19 88 C2H2 Transcription Factor Family AT1G67030 39.773 8.90e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1239 - - cam:101493460 188.734