Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1237 ATGGGAAGAGCTCCTTGTTGTGAAAAAGTTGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAAGATAAAATCTTGACTGATTACATCAAAGAAAATGGTGAAGGATCTTGGAGGTTTTTGCCTAAGAAAGCAGGTTTGTTAAGGTGTGGGAAGAGTTGTAGACTAAGATGGATCAACTATTTGAGAGCAGATGTGAAGAGAGGAAACATATCCCCTCATGAGGAAGAAATCATTGTCAAGTTGCATGCTGTTCTTGGAAATAGGTGGTCGGTGATAGCATCACATTTACCAGGACGAACAGATAATGAGATAAAGAACTATTGGAACTCTCATTTAAGAAGGAAAATTTACTGCTTCATGAGATCCATTAACGAGTCTCCACCACCTCTTGACATGGCATCTACATCCAAAACAATTAATCAAGGGAAAATAAATAATCCAAGCATAGAAGAAGACAATGGCATGTCTTTGATTCAAAATTCCCTTGAACCAATGCCTAAAGAAAAAACAACTTCGCAATACTATAATGTACAAGGAGTTGAAGATATTTCATCTGAGAATAGTATTTATGAAATGAAGGGTAACATAAATAATACAGTTGCATCATACCCTAGCAAAAATGAATTGAATATTGATGAGGGTTTGGGACCATATAAATGGCTAGATGATGAAATTATGAAACTTCGTAACATGTTTTTAAATGGGATAGGAAATTATAATTATGTAACAATGCATGAGAATGATGAGAAGGGTAAATATGAGTGTGACTCTAGAAAGATGCATGTGGAGATAATGGAAACAAATAAGGAAATGAAAAGTGAAATTTGTGGCTCATCATATAATGGTGAAAGTGGAGAAGGGTACATTTCTAATGCATCAGTAAATTCTGCCACAGATTATGATCAATTGTCTGATTGGGACTTTTGTCAAGAAGACCAAATGAAGACTTGCTTGTGGGGTCCAGGCATTGGTGAAATCATGAATGGTTTTTATCAGTAA 999 0.3574 MGRAPCCEKVGLKKGRWTAEEDKILTDYIKENGEGSWRFLPKKAGLLRCGKSCRLRWINYLRADVKRGNISPHEEEIIVKLHAVLGNRWSVIASHLPGRTDNEIKNYWNSHLRRKIYCFMRSINESPPPLDMASTSKTINQGKINNPSIEEDNGMSLIQNSLEPMPKEKTTSQYYNVQGVEDISSENSIYEMKGNINNTVASYPSKNELNIDEGLGPYKWLDDEIMKLRNMFLNGIGNYNYVTMHENDEKGKYECDSRKMHVEIMETNKEMKSEICGSSYNGESGEGYISNASVNSATDYDQLSDWDFCQEDQMKTCLWGPGIGEIMNGFYQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1237 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr2g1237 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr2g1237 332 PANTHER MYB TRANSCRIPTION FACTOR 2 295 - -
Mtr2g1237 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr2g1237 332 CDD SANT 16 61 IPR001005 -
Mtr2g1237 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr2g1237 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr2g1237 332 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 295 - -
Mtr2g1237 332 Gene3D - 71 116 - -
Mtr2g1237 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr2g1237 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr2g1237 332 CDD SANT 71 112 IPR001005 -
Mtr2g1237 332 SMART sant 13 63 IPR001005 -
Mtr2g1237 332 SMART sant 66 114 IPR001005 -
Mtr2g1237 332 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1237 Mtr-Chr2 13414710 13417767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1237 1 228 MYB Transcription Factor Family AT5G49330 53.680 1.63e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr2g1237 Myb_DNA-binding 9.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1237 K09422 - gmx:100819041 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1237 2 13414710 13417767 Mtr2g1237 2 13414710 13417767 ECH