Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1230 ATGATGGCACAAAACAACTTAACAGGACAGCTTGTTGGTTCAGAGATACATGGATTCCACACCTTGAGAGACCTGGATGTCGGCGAAACCCTGGAGGAAGCAAAAAGCAGATGGCTTCGTCCGAATGAGATTCACGCCATACTCAGCAATCACAAATATTTTACTATCCATGTCAAGCCATTGAATTTGCCCAAAAGTGGTACTGTTGTACTATTTGACCGCAAGATGCTTAGGAACTTCCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAGAGAATCCACGTATATTATGCTCACGGCCAAGATAACCCAGGCTTTGTTCGGAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCACATAGTCCTGGTTCATTATCGTGAAACACAAGAGTCTCAAAGTTCTCCCGTTACACCGTTAAATTCAAATTCGAGTCCTATTTCTGATCCAACTACACCATGGATTCTATCAGAAGACTTAGATTCTGGAACCAGCAGTGGTTATACGAATGGTCTTAATGGAAATTTAACAGTCAGAAGTCATGAACAGAAGCTTCATGAGCTTAATACACTTGATTGGGATGAACTAGTGGCTTCTAATGCTAATACCCCTACTATAAAAAATGGAGGAAACGAACCGCGTTACTATCAACTAAATCAAAGCTTACCGAATGGCAGCTTTGACAATGTTGCTGGTAATCCTTCCTCAGAAATTCCTTCGTATGGTATTCTAACTCCGCCAGAGTCCGGGAGCAGTAATGTTTCTTACTGTTTCCCAGAAAGTGTTAACGATCAAAAGAATCATTCTATGAATTTTGGTGGTGTTGATTCCGTTGACACTTTAGTCAATGAAGGTTTGCAAAGTCAGAATAGCTTTGGAACGTGGATGAACAATGCCATATCTTACACACCATGTTCTGTAGAGGCGTCAACTCTTGAATCGTCAATGCCTTCGTCTGTTACTGATCCATTTTCATCAGTGGTGATGGATAATCAACAATCTTCTCTTCCGGAACAAGTATTTCATATTACTGAGGTGGCCCCTTCATGGGTTTCTTCCACTGAGAAAACAAAGGTCCTGGTAACTGGATATTTTCTCTTTGATTATCAATACCTTGCAAAGTCCAATATAATGTGTGTCTGTGGCGAAACAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGTTGGGTATTGCCGCATTCTCCTGGATTCGTGAATCTCTATTTGAGCTTCGATGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAATATCGCACTCCTATTTTGCACGATCCTGCTGCTTCAATGGAGGAGACATACAACTGGGTTGAATTTCGTCTTCAAATGAGGCTTTCTCATTTGCTTTTTACAACACCGAAGACCCTTGATGTTTTCTCTAGTGAAGTATCACCTACTTCACTGAAAGAGACTAAAAAATTCGCCTCCAAAACATTATTTCTTTCCAAAAGTTTTCTACACTTCATGAAGTCGTCTGACGCAAACGCACCTCCCTTTCCGCAAGCGAAAAATACCTTGTTCGAAATTGCGTTGAAAAACAAACTCAGGGAATGGCTTTTGGAACGTATTGTTTTAGGATGTAAGACTACTGAGTATGATCCACAAGGCCAAAGTGTAATTCATTTGTGTGCAATGTTGGGATATACATGGGCTATTACTTTGTTTTCGTGGTCAGGCTTGTCTCTGGATTTCCGCGACAAATTTGGATGGACGGCTCTTCATTGGGCAGCATATAATGGAATGGAGAAAATGGTTGCTACGCTGTTGTCTAGTGGAGCAAAGCCCAATTTGGTGACAGATCCAACTCCCGAAAACCCTGGTGGCTGTACTGCGGCTGATCTTGCTTATATGAAAGGATATGACGGTTTAGCCGCTTATCTTTCAGAAAAGAGTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGTTCACTCCAAACCACTACAACTGATCCAGTAAATGCTGAGAACCTTACAGAGGACCAAGTGTACTTAAAGGATACATTGGCAGCTTACCGGACAACAGCCGAGGCAGCAGCACGCATACAAGCAGCATTTAGGGAGCACTCATTAAAATTGCGATATCAGTCGGTTCAATTTATCAGTCCAGAGGAGGAAGCACGCCAGATAGTAGCAGCAATGAAAATTCAACATGCCTTTCGCAACTTTGAGACAAGAAAAGCGATGGCAGCCGCTGCTCGGATCCAGTACAGGTTCCGCTCATGGAAGTTGCGTAGAGAGTTTCTCCACATGCGACGTCAGGCTATTCGAATTCAAGCTGCATTTAGAGGCTTTCAAGTGCGTAGGCAATATCGTAAGATTCTATGGTCTGTTGGAATTCTTGAGAAAGTAATCCTGCGTTGGCTTTTAAAGAGAAAAGGTTTCCGTGGGCTTGAGGTGAATCCGGATGAAGACATGAAAGATGAGAAGCAGGAAAGCGATGTAGAGGAGGACTTCTTTAAGACTGGTAGGAAACAAGCGGAAGAACGTGTTGAGAGATCTGTGGTACGCGTACAAGCCATGTTCCGTTCTAAGAAAGCACAGCAAGAGTATAGCAGGATGAAGATGGCACATAGTCAAGCACAGTTGGAACTTGAATTAGAAGAACTCATCAATTCTGATGTGGACATGTTAACAACAAAGACATCATAA 2748 0.421 MMAQNNLTGQLVGSEIHGFHTLRDLDVGETLEEAKSRWLRPNEIHAILSNHKYFTIHVKPLNLPKSGTVVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGFVRRCYWLLDKSLEHIVLVHYRETQESQSSPVTPLNSNSSPISDPTTPWILSEDLDSGTSSGYTNGLNGNLTVRSHEQKLHELNTLDWDELVASNANTPTIKNGGNEPRYYQLNQSLPNGSFDNVAGNPSSEIPSYGILTPPESGSSNVSYCFPESVNDQKNHSMNFGGVDSVDTLVNEGLQSQNSFGTWMNNAISYTPCSVEASTLESSMPSSVTDPFSSVVMDNQQSSLPEQVFHITEVAPSWVSSTEKTKVLVTGYFLFDYQYLAKSNIMCVCGETSVPVEIVQVGVYRCWVLPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAASMEETYNWVEFRLQMRLSHLLFTTPKTLDVFSSEVSPTSLKETKKFASKTLFLSKSFLHFMKSSDANAPPFPQAKNTLFEIALKNKLREWLLERIVLGCKTTEYDPQGQSVIHLCAMLGYTWAITLFSWSGLSLDFRDKFGWTALHWAAYNGMEKMVATLLSSGAKPNLVTDPTPENPGGCTAADLAYMKGYDGLAAYLSEKSLVEQFNDMSLAGNISGSLQTTTTDPVNAENLTEDQVYLKDTLAAYRTTAEAAARIQAAFREHSLKLRYQSVQFISPEEEARQIVAAMKIQHAFRNFETRKAMAAAARIQYRFRSWKLRREFLHMRRQAIRIQAAFRGFQVRRQYRKILWSVGILEKVILRWLLKRKGFRGLEVNPDEDMKDEKQESDVEEDFFKTGRKQAEERVERSVVRVQAMFRSKKAQQEYSRMKMAHSQAQLELELEELINSDVDMLTTKTS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1230 915 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Mtr2g1230 915 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
Mtr2g1230 915 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Mtr2g1230 915 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 16 910 - -
Mtr2g1230 915 SMART iq_5 706 728 IPR000048 GO:0005515
Mtr2g1230 915 SMART iq_5 782 804 IPR000048 GO:0005515
Mtr2g1230 915 SMART iq_5 862 884 IPR000048 GO:0005515
Mtr2g1230 915 SMART iq_5 740 762 IPR000048 GO:0005515
Mtr2g1230 915 Gene3D Immunoglobulins 354 450 IPR013783 -
Mtr2g1230 915 Gene3D - 528 665 IPR036770 -
Mtr2g1230 915 Pfam Ankyrin repeats (3 copies) 538 625 IPR002110 GO:0005515
Mtr2g1230 915 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 910 - -
Mtr2g1230 915 ProSiteProfiles IQ motif profile. 864 892 IPR000048 GO:0005515
Mtr2g1230 915 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Mtr2g1230 915 ProSiteProfiles Ankyrin repeat region circular profile. 596 624 - -
Mtr2g1230 915 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Mtr2g1230 915 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Mtr2g1230 915 Gene3D - 760 807 - -
Mtr2g1230 915 SUPERFAMILY Ankyrin repeat 531 658 IPR036770 -
Mtr2g1230 915 SMART ANK_2a 596 625 IPR002110 GO:0005515
Mtr2g1230 915 SMART ANK_2a 635 666 IPR002110 GO:0005515
Mtr2g1230 915 SUPERFAMILY E set domains 361 447 IPR014756 -
Mtr2g1230 915 ProSiteProfiles IQ motif profile. 707 736 IPR000048 GO:0005515
Mtr2g1230 915 SMART CG_1_2 30 148 IPR005559 GO:0003677
Mtr2g1230 915 ProSiteProfiles IQ motif profile. 760 786 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1230 Mtr-Chr2 13327863 13334641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1230 31 896 CAMTA Transcription Factor Family AT3G16940 57.454 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mtr2g1230 CG-1 1.8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1230 K21596 - gmx:100819198 1367.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1230 2 13327863 13334641 Mtr2g1230 2 13327863 13334641 ECH
Mtr4g4437 4 58388447 58396051 Mtr2g1230 2 13327863 13334641 PCT