Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1227 ATGTTTGTTGTTGCATCTTCCATTTGCAGTGATATTCCACTCTTAAAACCAATAAAGATGAAAACTTTCTCATCAATTCAACCACCCCACAATTTCCATTCCACACTTTTTTTCTCTTACACTTCCATAAGATTTTGCATCAGGACTCAACTTCCTTCCTCTACAAGGGTCTTCTTTTCTCAGGAAAAATCTGACACAGATGAGTCATTAAGCGTAAAACTGTTGCCTCCAACCCTATTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTAACCTTGTTTTTGAAGAAACGAGGTTTGAGCAATGCAAATGCAGCAAGAACGATTAACAAGTCAGATCCTTTTATTGATCACCTTCTCTCAAAGCTTCACTCTAAACACAAAACTTGGTACCTTTCAGGGAGAGAGCTTACAACTCTTGAGATCAGGGATGCTCTTATCTCTTATCTTGAATCACTTTACGAAGAGCATGGAGAAATTCTAGTGGATGCAGTGGAAAACTATCCAAATCCACCCGTTAAGGATAAATCGGACGCACCAATTCCACCTCCTAATCCTAGTCCAGCGGTAGACTCTAAGAAAGTTAAAGCCGTGTCTCGAGTGAGTGGTATAGACCCTGCTGAGGGAAATCTTCGTCCTCATATTGCTTATCTGATGGAACTCGGAATGAATACCGACCAGGTTAGGAGTATTATGCGACGATTCCCAGCTTTTGCCTACTATAGTTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTACCAAAAGAAAAAATTATCATTATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGTCTATCTAAAAATCTTAAGCCCACCATGAAATTCTTTGAATCTTTAGGTGTTGACAAGGAACAATGGGCGAAAGTGATCTACCGTTTCCCAGCCCTGCTAACTTATAGCACGCAGAAGATTAATGAAAGTTTAGATTTTCTCCGCGAATTTGGCGTCTCAGAAGAGAACATAGGTAAGATTTTAACTCGCTGCCCAACTATTGTTAGTTACAGTGTAGAGGACAATCTTCGACCGACAGCAATGTACTTCCGTTCTCTGGGGGTTGATGTTGGCCTTCTTCTATTCAATTGTCCACAAAATTTTGGTCTTAGCATTGAGGCCAATATAAAGCCCGTAACACAATTTTTCTTGGAGAGAGGATACACCATGGAAGAAATTGGGATTATGATTAAAAGATATGGAATGTTGTACACATTCAGCTTGACTGAGAATTTGATGCCGAAATGGGATTACTTTTTGACTATGGATTACCCAAAATCTGAGCTGGTTAAATTCCCTCAATTTTTTGGATACAGTTTAGAGCAAAGAATTAAACCGAGATATACACGCGTGAAAATTTCTGGGGTGAGATTACTGTTGAATCAGGTTCTTTCACTGTCAAGCAGCAACTTTGAAGAGATCTTAAGAAAGAAAATAATGAAAATGCAAGTTGATTAG 1491 0.3917 MFVVASSICSDIPLLKPIKMKTFSSIQPPHNFHSTLFFSYTSIRFCIRTQLPSSTRVFFSQEKSDTDESLSVKLLPPTLLAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTTLEIRDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVSRVSGIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGVDVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVKFPQFFGYSLEQRIKPRYTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQVD* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1227 496 PANTHER CGI-12 PROTEIN-RELATED 45 495 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 MobiDBLite consensus disorder prediction 175 189 - -
Mtr2g1227 496 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 437 468 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 301 331 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 192 224 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 SMART mt_12 369 400 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 Pfam mTERF 208 395 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 Pfam mTERF 322 483 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 Pfam mTERF 76 325 IPR003690 GO:0003690|GO:0006355
Mtr2g1227 496 MobiDBLite consensus disorder prediction 172 191 - -
Mtr2g1227 496 Gene3D Transcription termination factor 3, mitochondrial 267 491 IPR038538 -
Mtr2g1227 496 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 45 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1227 Mtr-Chr2 13305851 13308829 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1227 mTERF 5.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1227 K15032 K12177 gmx:100781900 702.59