Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1213 ATGGAAAACTTGTGCAATTTTGGTGACTTGAGTTTCAATATAGTTGAGGATAAACTTAGTTCATCCAATGATATTTTTTGGGAAACCAACAAACTTAGTGAAATGAAAAATGTTAAATTTTCTGTAGAAGAAGATCTAGGAGACTACAATGGAATTGAGTCTCTTTGCTCTAATTTTGGTTTCTTTCAAGATGATCCATCACAAGAAGATGAGCTTCTTCTTTCCACTGATCAACAAAAGTATCATCAACAACCATATCAAGATTACGAATCTTTTGATAATCTACACTTTGACATGGTTCAATTTGATGAACAACAATGTCCAACAAAAAACCCTCCACTTTGTGACACAAAAAAAGATCAACAATTCTACCAAACTCCACCAATTGAGATATTGAAGAATTATGGCAAAGGATTTAAGAGGTTATCACCTGATGAAGGAAAAATCCATCATCCTGAAAATGAGAGTAAGCTGTCAACTGAAGATATCATGAAGATAGCTGGAACAAGGTTCATACAATCATCATCTTTGTCGGAATCTGCATCAGGTTTGATTCTTGATCACCCTTTTGGTTTTTCTTTCTCTGGTTTATCTGATGAAGAGAAAGAAGATGTTTCACTTGCTGAATCACTCTTAGCTTGTGCTGAGAAAGTTGGATATCAACAATATGAACGCGCTAGAAAATTGTTATTACAAATTGAGTCTTTATCTTCGAAGACAGGTAACCCAGTTAAGCGCGTGGTTCATTATTTTGCCGAAGCTCTTCGACAAAGAATCGACAAAGAAACGGGAAGAGTTTCTGTTTCGACAAACAATATGAAAAAGATGGGACCTTTATTTGATCCTCAAGAGGTAACCAAGGATCTAAATCCAGCCCTTGTCGCGTTTTTTCAAGATCTTCCATTTTGTAAAATTTCCATGTTCACATGTGTACAAACTTTAATAGAAAATGTAACTAATGCTAAGAAGATTCATGTTATTGATCTCGAAATCCGAAAAGGGTTACAATGGACAATCCTAATGCAAGCACTTCAATCGAGAAACAAATGTCCCGTTGAGCTTCTAAAGATAACAGCTATTGTGACTGGAAACATAGAGACTTTGAAGAATATAGTTGAAGACACTGGTAAAAGATTGAAGGATTTTGCGCGATATTTGAACATACCTTTCTTATTCGATACAATTATTGTATCTGATTTATTACATTTAAGAGAAGATCTTTTCAAGATAGACTCTGAGGAAACCGTTGCGGTTTACTCTCAGTTTGCGCTTCAAAGCAAGATTCAACAATCAGACCAACTTGAAACAATCATGAGAGTAGTTAGAACCATAAACCCTAAAGTAATGGTTGTGGCCGAGATTGAAGCTAATCACAATTCTAAATCATTTGTGAACCGTTTCATCGAAGCACTTTTTTACTTCAGTGCATTTTTCGATTGTTTTGAGGATTGTATGAAAGATGATGAGAACAGAATGATTTTAGAATCAAAGTATTTTGGTCATGGAATTAGGAATATGGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTGAAGATTGATGTGTGGAGAGCATTTTTCGCAAGATTTGGAATGGTGGAAACAGAATTGAGCATGATGTCTTTGTATCAAGCTGAATTGATGGCTAAAAGATTTCCCTGTGGAATTTCTTGCACATTTGATATGAATGGTCATTGTCTTCTTGTTGGATGGAAAGGAACACCAATTAACTCTGTTTCTGTTTGGAAATTCATTTGA 1761 0.3515 MENLCNFGDLSFNIVEDKLSSSNDIFWETNKLSEMKNVKFSVEEDLGDYNGIESLCSNFGFFQDDPSQEDELLLSTDQQKYHQQPYQDYESFDNLHFDMVQFDEQQCPTKNPPLCDTKKDQQFYQTPPIEILKNYGKGFKRLSPDEGKIHHPENESKLSTEDIMKIAGTRFIQSSSLSESASGLILDHPFGFSFSGLSDEEKEDVSLAESLLACAEKVGYQQYERARKLLLQIESLSSKTGNPVKRVVHYFAEALRQRIDKETGRVSVSTNNMKKMGPLFDPQEVTKDLNPALVAFFQDLPFCKISMFTCVQTLIENVTNAKKIHVIDLEIRKGLQWTILMQALQSRNKCPVELLKITAIVTGNIETLKNIVEDTGKRLKDFARYLNIPFLFDTIIVSDLLHLREDLFKIDSEETVAVYSQFALQSKIQQSDQLETIMRVVRTINPKVMVVAEIEANHNSKSFVNRFIEALFYFSAFFDCFEDCMKDDENRMILESKYFGHGIRNMVAEEGAERKSRNVKIDVWRAFFARFGMVETELSMMSLYQAELMAKRFPCGISCTFDMNGHCLLVGWKGTPINSVSVWKFI* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1213 586 Pfam GRAS domain family 208 584 IPR005202 -
Mtr2g1213 586 ProSiteProfiles GRAS family profile. 198 584 IPR005202 -
Mtr2g1213 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 584 IPR005202 -
Mtr2g1213 586 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 41 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1213 Mtr-Chr2 13158519 13160503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1213 197 585 GRAS Transcription Factor Family AT3G03450 30.867 3.42e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g1213 GRAS 1.2e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1213 - - gmx:100798926 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1213 2 13158519 13160503 Mtr2g1213 2 13158519 13160503 ECH