Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1212 ATGGAAAACTTATACAATTTGGGTGACTTCAGTTTCAATATAGTTGAGGATAAACTTAGTTCATCCAATGATACATTTTGGGAAACCAAAGGGCATAATGAAATGAAAAATGTACAATTTTCTGTAGCAGAAGATCTAGGAGACTATAATGGAATTGAGTCTCTTTGCTCTAATTTTGGTTTCTTTCAAGATGATCCATCATATCAAGAAAATGAGTTCCTAAAGTTTCATCACCAACAACAAGAATCATATCAAGATTATGAAACTTTTGATAACCTACACTTTGACATGGTTCACTTTGGTGACACAAAAAAGGACCAACCATTCTACCAAACTCCTTTAGCACCAGTTGACATATTGAAGAATTATGGCAAAGGATTCAAGAGGCTATTACCTGATGATGAAGGAAATATCCTTCATCCGGTTAATGACTTTGGTTTAGTCACAAATAATGAAAATGAGAAAAAGTTGTTGTCAACTATAGAGATCATGAAGATGGCTGGAACAAGGTTCATACAATCATCGTCTTCGTCAAAATCTGCATCAGGTTTGATTCTTAATCACCCTTTTGGTTTTTCTTTCTCCGGTTTATCTGATGAAGAGAAAGAAAATGTTTCGCTTGCTGAATCACTCTTAGCTTGTGCTGAGAAAGTCGGATATCAACAATATGAACGCGCTAGAAAATTGTTATCACAAATCGAGTCTTTATCTTCGAAGACAGGTAACCCGGTTAAGCGTGTGGTTCATTATTTTGCTGAAGCTCTTTGTCAAAGAATCGACAAAGAAACAGGACGATTTTCTGTTTCATCCAACAATATGCAAAAGATGGAATCTTTATTTGATCCTCAAGAGGTTAGCAAGGATCTAAACCCGGCCATGATCGCGCTTTACGAAGATCTTCCATTCAGTCAAGTTTCAATATTCACTTGTGTACAAGCTTTATTGGAAAATGTAAATGATGCAAAGAAGATTCATGTTATTGATCTCGAAATTCGAAAAGGGTGTCAATGGACAATCCTTATGCAAGCACTTCAATCGAGAAACGAATGTCCACTCGAGCTTCTAAAGATAACAGCTATTGAGAGCGGAAACTCAGACACTTCAAAGCATATAGTTGAGGACACTGGTAAAAGATTGAAGGATTTCGCGCAAAGTTTAAACATACCTTTTTCGTTCGATATAGTTGTTGTATCTGATTTGTTACATATAAGAGAAGAACTTTTCAAGATAGATTCGGAAGAAACAGTCGCGGTTTATTCTCAATTTGCGCTTAGAAGCAAGATTCAACAACCAGACAAACTCGAAACAATCATGAGAGTGATTAGAACCATAAATCCTATAGTAATGGTTGTCGCCGAGATTGAAGCTAATCACAATTCCAAATCTTTTGTGAACCGTTTCATTGAAGCACTTTTTTACTTTAGTGCATATTTTGATTGTTTTGAGACTTGTATGAAAGGTGATGAGAAGAACAGATTTATACTAGAGTCAATGTATTTTAGTCATGGTATTAGGAATATTGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGGAATGTAAAGATTGATGTGTGGAGAGCATTTTTCACAAGATTTGGAATGGTGGAAACAGAATTGAGTATGAAGTCTTTGTATCAAGCTGAATTAGTGGCTAAAAGATTTGCTTGTGGATATGCTTGCACATTTGATATGAATGGTCATTGTCTTCTTGTTGGATGGAAAGGAACACCAATTAATTCTGTTTCTGTTTGGAAATTCATCTGA 1764 0.356 MENLYNLGDFSFNIVEDKLSSSNDTFWETKGHNEMKNVQFSVAEDLGDYNGIESLCSNFGFFQDDPSYQENEFLKFHHQQQESYQDYETFDNLHFDMVHFGDTKKDQPFYQTPLAPVDILKNYGKGFKRLLPDDEGNILHPVNDFGLVTNNENEKKLLSTIEIMKMAGTRFIQSSSSSKSASGLILNHPFGFSFSGLSDEEKENVSLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALRSKIQQPDKLETIMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACTFDMNGHCLLVGWKGTPINSVSVWKFI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1212 587 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 41 585 - -
Mtr2g1212 587 Pfam GRAS domain family 208 585 IPR005202 -
Mtr2g1212 587 ProSiteProfiles GRAS family profile. 198 585 IPR005202 -
Mtr2g1212 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 585 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1212 Mtr-Chr2 13154192 13156191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1212 197 586 GRAS Transcription Factor Family AT3G03450 30.203 5.70e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g1212 GRAS 9.6e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1212 - - gmx:100798926 731.095