Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1208 ATGGCGTTTTGGTGGTCCATTCTCGTTCTTGCATTCGCTTTCGCTATCTGCAAGTTCCTTCTCCTTCTCATTCCTCCCAAAGTTCCTTCGATCGACGTTGATGCTTCCGATGTGTTGGAAGTTGGAAACCAATCGCAGGAGAATAATTTCATATATGTGCCTCCAAGGGGAACGGCGCAGCAATCGGGCAAGAAAGTTCAGTGCTATGAGCCAGCCACCATGAAGTATTTGGGATTTCTTCCTGCTTTGGCGCCGGATGAGGTCAAGGAGCGAATTGAAAAAGTACGGAAAGCACAAAAAATGTGGGCAAAGACTAGCTTCAAGCAAAGGCGCCAGTTTTTACGTATACTACTGAAGTATATAATCAAACATCAAGCACTTATTTGCGAGATATCTTCACGTGATACTGGAAAAACAATGGTAGATGCTTCTCTAGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTATTGTCAGAGGGTGAAAAATGTTTGAAACCTGAGTACAGATCCTCTGGAAGATCAATGCTTCATAAGAGAGCCAGAGTGGAATTTCACCCCCTTGGCGTTATTGGGGCCATTGTGTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGGTGAAACAGGAGAAGCACTGGTGTCTTCTGTGGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGTAAGATGATAATGAAAAATGCTTCAGAGACACTTATACCAGTTACACTGGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGACGTGGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAGGTGGGCAGAACTGTGCTGGTGCTGAACGATTTTATGTCCATAGGAACATTTATCCATCTTTTGTCAGCAAGGTTACCAAGATCATAAAATCTGTTACAGCTGGCCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCACGAACATTCTGAAAAGCTTCTAGGTCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAAGTTTTGGACATATAGGCGAAGATGCTGTTGATCAGTATTTTCCCCCTACGGTGATTGTGAATGTGAACCACTCAATGAAATTGATGCAAGAAGAGGCATTTGGACCTATCATGCCGATAATGAAGTTTAGCTCTGATGAAGAGGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTCAGCTGTGCTGTTTTCTCAGGCAGTCAAAGTCATGCCAGAGAGATAGCTTCTCATATACATTGTGGGGTCGCTGCAGTTAATGATTTTGCATCGAATTACATGTGTCAGTCTCTGCCATTTGGGGGCGTAAAACACAGTGGATTTGGACGATTCGGTGGTGTTGAAGGCCTGCGAGCATGCTGCCTTGTAAAGTCAGTAGTTGAAGATAGATGGTGGCCATTCATTAAGACCAAGATACCAAAGCCTATTCAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCGCTATATGGTCTTAGCATATGGGATCGTTTGCAAGCATTGGTAAACGTTTTGAAAATGCTTACTGAGCAGAACTCTACAGGTGGCAATAAGAAGGAGAAATGA 1788 0.4306 MAFWWSILVLAFAFAICKFLLLLIPPKVPSIDVDASDVLEVGNQSQENNFIYVPPRGTAQQSGKKVQCYEPATMKYLGFLPALAPDEVKERIEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEKCLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSGGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEHSEKLLGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMKLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLSCAVFSGSQSHAREIASHIHCGVAAVNDFASNYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKKEK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1208 595 SUPERFAMILY ALDH-like 59 529 IPR016161 GO:0016491
Mtr2g1208 595 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Mtr2g1208 595 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Mtr2g1208 595 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Mtr2g1208 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Mtr2g1208 595 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Mtr2g1208 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Mtr2g1208 595 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Mtr2g1208 595 CDD ALDH_F15-22 69 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1208 Mtr-Chr2 13122589 13129787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1208 1 588 Aldehyde Dehydrogenase Gene Family AT3G66658 80.272 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1208 - - gmx:100816920 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1208 2 13122589 13129787 Mtr2g1208 2 13122589 13129787 ECH