Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1203 ATGGAATCTCCAGAACCAGAAGCAGAGCTTTTGAAGAAGATAGAAAGACTAGAAGCTGGTCAAGTTCATCTCAAGCAAGAAATGTCAAAGCTGAAGCTTTCTCAACGTAGAAGGTCTCACTCAGTTTCACCACAACGTTCAAGGTTAGGTGCTTCTGCTTCATCTGCTTCTTCTGCTGCTTCTGCAAGTAGTAAAGGATGTTCTTCACCTCTTCAAAGAGAAAGCCGTAGTAGTCATGATCCTCAAAATGGTGGTGGCAAGTATCTCAATATTTTGCAATCAATTGGTCATTCTGTTCATATTTTGGATCTTCAATGTCGTATTATATACTGGAACCCTAGTGCTGAAAATCTATATGGTTATACAGCAGAAGAAGTTCTTGGTCTCGATGGGATTGAAGTGCTTGTAGACCCTAGTGAATTTGATATAGCTAACGATATATTCAACCGTGTGAAAATGGGAGAGAGTTGGACTGGTCAATTCCCTGTTAAGAATAAGATAGGGGATAGGTTTGTAGTTGTTGCAACCGATACACCTTTCTATGATGATGATGGAAGTTTGGTTGGTGTCATTTGTGTCACAAGTGATTCAAGACCTTTCCTTGAGAACATAGTTCCTTTTTCAGCTAGGAAGAATGAAGAAAAAGATTCAGGTGTTAATTTTCCTAGAATTGCTATTACAAATAAACTTGGTCTTGATCCAGAGCAGCCACTTCAAAATGCTCTAGCTTCTAAGATCTCAAATTTGGCTACAAAGGTGAGTAACAAAGTCAAGTCTAAAATCCGGACTCGAGAAAATAATGTTAATGGAGAAGGAGGGAGCAGCGAAAGTCATCATTCTGAGCACGGTTTCTCAGACTATGGTCATTCTGACCAGAGAGAGGATGGTGGTAATTCCAGTGGAGCTAGCACTCCCGCAGGAGAGGTGCCTCCAACTCCTTTTGGTTCATTCTCTCGCGCCGAAGAGAGATCCCAAGGGAAAACTATGAGAAACTCTGGTGATGAAAGTGAAGAAAAACCTATACACAAAATCATAACTTCTAGGGCAGAAGCATGGATTCAAAAGAAAACTATGTCATGGCCATGGAAAACAAATGACCGGGAAGAATCCGAGGCAAAGAATGTTCGTGTTTCTTGGCCTTGGTTGCAGGGTGATCAAGATAAAGAACCAGCTAACCAGAAGAATGCGTCTTCTGGATTGAAGCCTCCGGAAAGCCGGGCCGTTGAAAGTTATCAACCTGTTCAAAATGAAGCTACAGGATCCTGGTCCTCCTTCAATGCGAACAGCACAAGTAGTACTAGCAGCTGTGGGAGTGGTAGTGGCAGCAGTTCTGCTGCCAATAATAGAGTGGATGTAGACAGTGATTGTCTAGATTATGAAATTTTGTGGGAGGACCTGACGATTGGAGAGTCAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCTGTTAAGGTTTTCTCAAAGCAAGAATATTCAGAAGATGTTATACAGTCCTTCAGACAAGAGGTGTCTCTCATGAAAAGACTTCGCCATCCAAATATTCTTCTCTTTATGGGCGCAGTGACTTCACCTCAGCGTCTATGCATTGTAACAGAGTTTCTCCCACGCGGAAGCTTATTTCGTTTGCTTCAGAGAAACACGTCCAAACCTGATTGGAGACGACGAGTTCACATGGCCGTAGATATTGCACGAGGTGTGAATTATCTTCATCATTGTAACCCTCCAATCATCCATCGAGATTTAAAGACTTCAAATCTTCTAGTTGACAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTATCAAACATGAAACCTATCTCGAGACTAAGACTGGAAAAGGAACGCCTCAATGGATGGCACCAGAAGTTCTCCGTAACGAACCCTCAAATGAGAAGTCCGACGTTTACAGCTTTGGGGTGATAATGTGGGAACTTGCAACAGAAAAAATCCCTTGGGATACTCTCAATGCAATGCAGGTTATTGGAGCTGTAGGATTTATGAACCACCGGCTAGAAATTCCGGAAGATATTGATCCACAGTGGGCTTCTATAATCGAGAGTTGTTGGCATACTGATCCGGCTCTCCGACCAACATTCCAGGAACTTCTGGAAAGGCTTAAAGAACTTCAGAGACGGTATGCCATTCAGTTCCAAGCAGCCAGATCTGCTGGTGGGGAAAAGACTCAAAAAGAGTCCTAG 2235 0.4268 MESPEPEAELLKKIERLEAGQVHLKQEMSKLKLSQRRRSHSVSPQRSRLGASASSASSAASASSKGCSSPLQRESRSSHDPQNGGGKYLNILQSIGHSVHILDLQCRIIYWNPSAENLYGYTAEEVLGLDGIEVLVDPSEFDIANDIFNRVKMGESWTGQFPVKNKIGDRFVVVATDTPFYDDDGSLVGVICVTSDSRPFLENIVPFSARKNEEKDSGVNFPRIAITNKLGLDPEQPLQNALASKISNLATKVSNKVKSKIRTRENNVNGEGGSSESHHSEHGFSDYGHSDQREDGGNSSGASTPAGEVPPTPFGSFSRAEERSQGKTMRNSGDESEEKPIHKIITSRAEAWIQKKTMSWPWKTNDREESEAKNVRVSWPWLQGDQDKEPANQKNASSGLKPPESRAVESYQPVQNEATGSWSSFNANSTSSTSSCGSGSGSSSAANNRVDVDSDCLDYEILWEDLTIGESIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDVIQSFRQEVSLMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKPDWRRRVHMAVDIARGVNYLHHCNPPIIHRDLKTSNLLVDKNWTVKVGDFGLSRIKHETYLETKTGKGTPQWMAPEVLRNEPSNEKSDVYSFGVIMWELATEKIPWDTLNAMQVIGAVGFMNHRLEIPEDIDPQWASIIESCWHTDPALRPTFQELLERLKELQRRYAIQFQAARSAGGEKTQKES* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1203 744 CDD STKc_MAP3K-like 472 718 - -
Mtr2g1203 744 PRINTS Tyrosine kinase catalytic domain signature 540 553 IPR001245 GO:0004672|GO:0006468
Mtr2g1203 744 PRINTS Tyrosine kinase catalytic domain signature 579 597 IPR001245 GO:0004672|GO:0006468
Mtr2g1203 744 PRINTS Tyrosine kinase catalytic domain signature 626 636 IPR001245 GO:0004672|GO:0006468
Mtr2g1203 744 PRINTS Tyrosine kinase catalytic domain signature 645 667 IPR001245 GO:0004672|GO:0006468
Mtr2g1203 744 PRINTS Tyrosine kinase catalytic domain signature 689 711 IPR001245 GO:0004672|GO:0006468
Mtr2g1203 744 SMART pas_2 86 152 IPR000014 -
Mtr2g1203 744 CDD PAS 99 196 IPR000014 -
Mtr2g1203 744 ProSiteProfiles Protein kinase domain profile. 466 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1203 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Mtr2g1203 744 MobiDBLite consensus disorder prediction 409 447 - -
Mtr2g1203 744 Gene3D Phosphorylase Kinase; domain 1 459 543 - -
Mtr2g1203 744 SUPERFAMILY PYP-like sensor domain (PAS domain) 90 193 IPR035965 -
Mtr2g1203 744 Pfam Protein tyrosine and serine/threonine kinase 466 718 IPR001245 GO:0004672|GO:0006468
Mtr2g1203 744 MobiDBLite consensus disorder prediction 363 447 - -
Mtr2g1203 744 MobiDBLite consensus disorder prediction 44 85 - -
Mtr2g1203 744 Coils Coil 711 731 - -
Mtr2g1203 744 SMART serkin_6 466 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1203 744 MobiDBLite consensus disorder prediction 275 293 - -
Mtr2g1203 744 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 26 742 - -
Mtr2g1203 744 Pfam PAS domain 100 196 IPR000014 -
Mtr2g1203 744 MobiDBLite consensus disorder prediction 323 342 - -
Mtr2g1203 744 Gene3D Transferase(Phosphotransferase) domain 1 544 744 - -
Mtr2g1203 744 ProSiteProfiles PAS repeat profile. 91 155 IPR000014 -
Mtr2g1203 744 SUPERFAMILY Protein kinase-like (PK-like) 455 718 IPR011009 -
Mtr2g1203 744 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 742 - -
Mtr2g1203 744 Gene3D PAS domain 97 199 - -
Mtr2g1203 744 TIGRFAM sensory_box: PAS domain S-box protein 88 196 IPR000014 -
Mtr2g1203 744 MobiDBLite consensus disorder prediction 255 342 - -
Mtr2g1203 744 MobiDBLite consensus disorder prediction 28 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1203 Mtr-Chr2 13047005 13053763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1203 1 735 MAP Kinase Kinase Kinase AT3G06620 58.518 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr2g1203 PK_Tyr_Ser-Thr 2.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1203 - - gmx:100800867 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1203 2 13047005 13053763 Mtr2g1203 2 13047005 13053763 ECH
Mtr4g4458 4 58563021 58569936 Mtr2g1203 2 13047005 13053763 PCT