Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1200 ATGAAACTTCTCATTTTTATTTTGTTTTTTGTACCATATTGTGCTCTTGCCTTTGATGTAAAAACGGTCATAGACTCTCCTATGTTAACACAAAAGATAGGAACTAATCGCACTATTAAAGTTGATATCAATGGAAATGGAGAATTTAAATCAGTACAAGCTGCCATAGATTCAATTCCTGAAGGAAATTCTAATTGGGTCATCGTCCATATTAGAAAAGGAGTATATAGAGAAAAAGTGCACATACCAAAGAATAAGCGTTATATATTTATGAGAGGAAATGGAAGAGGAAAAACTGCCATTGTTTGGTCTGAAAGCTCCTCTGACAACATAGCTTCTGCCACCTTCAAAGTTGAAGCCCCCGATTTCATTGCCTTTGGAATTAGCTTCAAGAATGATGCACCTACAGGAGTTGCCTATACTTCACAAAATCAATCTGTGGCAGCATTTGTGGCAGCAGAGAAAGCTGCATTTTATCATTGTGCATTTTACAGTACACACAACACACTCTTTGATTACAAAGGTAGACATTACTATGAGTCTTGTTACATTCAAGGCTCCATTGATTTCATATTTGGTCGTGGCAGAACCATCTTCCAAAATTGTGAGATATTTGTGGTTGATGACAAAAGGATATCAATTCGTGGGTCAATTACAGCTGCAAATAGAGAAAATGAAAGTGAGATGAGTGGATTTATATTTATCAAAGGCAAAGTTTATGGCATTGGTGGTGTGTACTTAGGAAGGGCTAAAGGTCCTTATTCTAGGGTCATTTTTGCTAAGACATACCTCTCCAAAACCATTGTCCCAGAAGGATGGACCAATTGGAGTTATGATGGTAGCACTGAACATCTTTACCATGCGGAGTATAAATGCCATGGACCTGGAGCCATAGCAGAGAAAAGAGCTTCTTGGTCAAGGCAACTTAGTGATGAAGAAGCTGCTCCATTTATATCTATTGATTACATTGATGGCAAGAATTGGTTACCAGCATGGCTATAA 1002 0.3772 MKLLIFILFFVPYCALAFDVKTVIDSPMLTQKIGTNRTIKVDINGNGEFKSVQAAIDSIPEGNSNWVIVHIRKGVYREKVHIPKNKRYIFMRGNGRGKTAIVWSESSSDNIASATFKVEAPDFIAFGISFKNDAPTGVAYTSQNQSVAAFVAAEKAAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRTIFQNCEIFVVDDKRISIRGSITAANRENESEMSGFIFIKGKVYGIGGVYLGRAKGPYSRVIFAKTYLSKTIVPEGWTNWSYDGSTEHLYHAEYKCHGPGAIAEKRASWSRQLSDEEAAPFISIDYIDGKNWLPAWL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1200 333 Pfam Pectinesterase 40 325 IPR000070 GO:0030599|GO:0042545
Mtr2g1200 333 SUPERFAMILY Pectin lyase-like 35 331 IPR011050 -
Mtr2g1200 333 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Mtr2g1200 333 PANTHER PECTINESTERASE 67-RELATED 6 332 - -
Mtr2g1200 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 332 - -
Mtr2g1200 333 Gene3D - 33 332 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1200 Mtr-Chr2 13028195 13030187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1200 5 329 Carbohydrate Esterase AT5G47500 37.069 8.75e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1200 - - mtr:MTR_2g033970 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1200 2 13028195 13030187 Mtr2g1200 2 13028195 13030187 ECH