Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1197 ATGCTTCAGTCATTGATGAATCTTCTCTCTCCATGTTGGAAGCCGTTCGGGCACGGTGGTGACGATTCTTCATCCGCCGTTGTTGGAAGAGAAGGGAAAGACGGATTGCTTTGGTTTCGTGATATCGGAAAATATGGCTCCGGTGAATTCTCTATGGCTGTTGTTCAAGCGAATCAGATTCTTGAAGATCAGTGTCAGATCGAATCTGGACCGCTTGGAACGTTTGTAGGTGTTTATGATGGTCATGGTGGACCTGATGCTGCTCGTTACGTTTGTGATCATTTGTTTCGTAATTTTCAAGCGGCATCAAGTGAGTCACGGGGTGTTGTGACTGAAGAGACAATTCGATCGGCATTTCGTTTAACAGAAGAGGGGTTTACTGCTATGGTTACTGAACTGTGGAATACTCGGCCTCAAGTTGCAACTACTGGAACATGTTGTTTGGTTGGAGCAATTTTTCAGCAGACCCTTTTTATTGCGAATCTAGGAGATTCCCGTGTTGTGTTGGGAAAGAAAGTTGGGAATACTGGTGGGGTTGCAGCTATTCAGCTGTCTACGGAACATAATGCGAATCTTGAGGCTATTAGACATGAACTTAAAGAATTACACCCTCATGATCCACAAATTGTTGTCCTCAAGCATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAAATCTATAGGGGACGTATATATGAAACATGCACAGTTTAACCGGGAACCAATTAATGCGAAGTTCAGACTTCCTGAACCAATGCACATGCCTATCTTGTCTGCTAATCCATCTATTCTTTGTCATCCTCTCCAACCAAATGATTCATTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAATAATGACCAAGCAGTCGAGATTGTCCACAGAAATCCACGTGCTGGTAGTGCCAAGAGACTTATCAAGGCGGCCCTGCAGGAAGCAGCCAGAAAACGTGAAATGCGATATTCAGACCTTCGTTCAATTGACAAGAAAGTTCGACGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCATGACCTTATAACTAGAGGTACAGTTCAAAACCCGCCACTGTCAATTCGAAGTGCTCTCAATCACTGA 1122 0.4305 MLQSLMNLLSPCWKPFGHGGDDSSSAVVGREGKDGLLWFRDIGKYGSGEFSMAVVQANQILEDQCQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRNFQAASSESRGVVTEETIRSAFRLTEEGFTAMVTELWNTRPQVATTGTCCLVGAIFQQTLFIANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANLEAIRHELKELHPHDPQIVVLKHGVWRVKGIIQVSKSIGDVYMKHAQFNREPINAKFRLPEPMHMPILSANPSILCHPLQPNDSFLIFASDGLWEHLNNDQAVEIVHRNPRAGSAKRLIKAALQEAARKREMRYSDLRSIDKKVRRHFHDDITVIVLFLNHDLITRGTVQNPPLSIRSALNH* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1197 373 CDD PP2Cc 50 350 IPR001932 -
Mtr2g1197 373 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Mtr2g1197 373 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 373 - -
Mtr2g1197 373 Gene3D - 40 359 IPR036457 -
Mtr2g1197 373 SUPERFAMILY PP2C-like 58 351 IPR036457 -
Mtr2g1197 373 PANTHER ALPHABET, ISOFORM E-RELATED 3 373 - -
Mtr2g1197 373 SMART PP2C_4 36 348 IPR001932 -
Mtr2g1197 373 ProSiteProfiles PPM-type phosphatase domain profile. 46 350 IPR001932 -
Mtr2g1197 373 Pfam Protein phosphatase 2C 73 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1197 Mtr-Chr2 13001156 13006737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1197 1 303 PP2C-type Phosphatase Gene Family AT3G17090 68.269 5.13e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1197 K01102 - gmx:100811922 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1197 2 13001156 13006737 Mtr2g1197 2 13001156 13006737 ECH