Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1195 ATGTCATCACCTATGATCTCAAACCCAACATCAACAACTGATCGATCACACAGAATAAGAAAAAAGAAGAAAGCCCAATCCAAAACCCAGCAAGCCCAAGAACAACAACAGAGAGAAAATAGCCGTGCTAAATGGAGGTCACAAGCCCAACAACAAATCTACTCTTCCAAACTCCACCAGGCTCTGGCAAGAGTCAACATCGGCGGCACCACTGGAGGGCCTCGTCGAGGCAAGGCCGTCCGTGAAGCCGCTGACAGAGCTCTCGCCGTCGCCGCAAAAGGAAGAACAAGATGGAGTAGAGCCATACTAAAAAACAAGCTCAGACTCAAATTCCGAAAACAGAAGAGACATCAACAAAACCGGGCTGTTGGACCGGCCCGGTCTAAAAAAGCCCGGTTCGGTGTTTTACGTCTTAAAGGAAAGACTCTACCAGCGGTTCAGAGAAAAGTTAAAATTCTGGGCCGGTTAGTTCCTGGTTGTAGAAAAGAACCGTTACCGGTTATTCTTGAAGAAGTTATTGATTATATACCAGCTCTTGAGATGCAAGTTCGTGCCATGTCAGCCCTAGCTGATTTACTCTACGGTGCTTCCTCTTCCGCCGCCGCTGCCAGCGGTGGCTCCGGCTTCCCGCCGGCGAGTTAA 642 0.4922 MSSPMISNPTSTTDRSHRIRKKKKAQSKTQQAQEQQQRENSRAKWRSQAQQQIYSSKLHQALARVNIGGTTGGPRRGKAVREAADRALAVAAKGRTRWSRAILKNKLRLKFRKQKRHQQNRAVGPARSKKARFGVLRLKGKTLPAVQRKVKILGRLVPGCRKEPLPVILEEVIDYIPALEMQVRAMSALADLLYGASSSAAAASGGSGFPPAS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1195 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 195 IPR036638 GO:0046983
Mtr2g1195 213 MobiDBLite consensus disorder prediction 29 52 - -
Mtr2g1195 213 MobiDBLite consensus disorder prediction 1 52 - -
Mtr2g1195 213 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 17 208 - -
Mtr2g1195 213 Coils Coil 22 42 - -
Mtr2g1195 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 17 208 IPR044660 GO:0006355
Mtr2g1195 213 CDD bHLH_AtIBH1_like 135 190 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1195 Mtr-Chr2 12985505 12986810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1195 43 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.973 5.60e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1195 - - gmx:100792237 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1195 2 12985505 12986810 Mtr2g1195 2 12985505 12986810 ECH
Mtr4g4465 4 58628183 58629243 Mtr2g1195 2 12985505 12986810 PCT