Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1193 ATGGAGGAGGAGAAGAGAGAGGAGCACACAAACCCCACCAACTCATCATCCACCACCACCACCACCACCACCATGGCATTCTCCGATGAGATTCCAACAACCACCACCACCATCAACAACAACAACACATCTTTATTCCCTTTTCAACCTTCAATCTCTACCTTCTTTGATACCATACCATCTTCCTCTTGTGACCAAAAATCTTCTTCTTTTGGTTTCATGGACTTGTTGGGTTCCCATGATTACATCAACAACAACAACAACACTTTTTTATTATCGGATTGGGTTCCCACCGTCGCCACAACAACAACAACCCATCACACTCTTCCGTCACCCGGGAGTTCTAACATCCCGGACTCATCCGAGGTGTTTAACACTCCGGTGTCACCGAATTCTTCTTCGATATCTTCGTCGTCTAATGAAGCCACAGTTAACAACACCTTAGAACAGCATAGAAGTAAACTTTCAAAAATCGAAGCAGAGTTAGAAGGAGATGACCAAGATCAAGACAAGACTAAGAAACAATTGAAACCAAAGAAAAAGAACCAAAAAAAGGAAAGAGAACCCAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCACCTAGATGATGGCTATAGGTGGCGTAAATATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGAGCTACTATCGTTGTACAACGGCAAGCTGCGGCGTGAAAAAGCGCGTGGAGCGTTCTTCCGATGATTCTTCTATTGTCGTCACTACATACGAGGGTCAACACACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTCGTTCACCAACCTACTAGTTTCGGTGCTGCTTCGGGTTCACACTCACACTTTCTTCTACCAACATTGTTGTACAATAATCACAACTCCACTAGTAATAATAATATTACTACTACTACTACACCCCCTTCTTCTAATTATGTTGGTGGTTCTGGTGGTAGTTGTGTTAACACGTCGTCGTTTGGTGGTTTTGCGAATGACCAAGTGATTAATCATCGAGGTTTTGGATCTTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGATAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAAGAAGAAAAAGATTCAAGAAAAGAACAACATTAA 1143 0.4234 MEEEKREEHTNPTNSSSTTTTTTTMAFSDEIPTTTTTINNNNTSLFPFQPSISTFFDTIPSSSCDQKSSSFGFMDLLGSHDYINNNNNTFLLSDWVPTVATTTTTHHTLPSPGSSNIPDSSEVFNTPVSPNSSSISSSSNEATVNNTLEQHRSKLSKIEAELEGDDQDQDKTKKQLKPKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSFVHQPTSFGAASGSHSHFLLPTLLYNNHNSTSNNNITTTTTPPSSNYVGGSGGSCVNTSSFGGFANDQVINHRGFGSSGFVNEALLRDNGLLQDIIQMKKEEKDSRKEQH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1193 380 SUPERFAMILY WRKY DNA-binding domain 194 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g1193 380 Coils Coil 141 168 - -
Mtr2g1193 380 MobiDBLite consensus disorder prediction 1 25 - -
Mtr2g1193 380 ProSiteProfiles WRKY domain profile. 197 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1193 380 MobiDBLite consensus disorder prediction 103 148 - -
Mtr2g1193 380 MobiDBLite consensus disorder prediction 160 175 - -
Mtr2g1193 380 MobiDBLite consensus disorder prediction 160 190 - -
Mtr2g1193 380 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 368 IPR044810 GO:0003700
Mtr2g1193 380 Pfam WRKY DNA -binding domain 203 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1193 380 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 69 368 - -
Mtr2g1193 380 Gene3D WRKY domain 187 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g1193 380 SMART WRKY_cls 202 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1193 Mtr-Chr2 12940256 12942553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1193 70 372 WRKY Transcription Factor Family AT2G47260 44.753 6.88e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g1193 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1193 - - mtr:MTR_2g033820 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1193 2 12940256 12942553 Mtr2g1193 2 12940256 12942553 ECH
Mtr2g1193 2 12940256 12942553 Mtr4g4466 4 58660271 58662550 PCT