Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1174 ATGCATTCAACACAAAGAAGACCCAATAAACAGTTAAAGGAAAAGGAGGACTACATTGATGTTGTTGGTGACGCTGTTCATGCTTGTTGGGTCCCACCTCTCCTTCAACCACAGCTCATTTTACAGGATAAACCACCACAAGAGATAAAGAAAGAGCCTAAAGTTAAAATCAAATTCAAATTTACAGGGAAGCCAAAAAATGAGCCAAAGTTTAGAAAGGGGGAAATAGTTGAGGTTAGCAGCGACGAAGAAGGTTATCAAGGTGCTTGGTTTGTTGCTACTATTATTGACACATTAGGAAATGAAAAGTTTTTAGTTGAACATAGAGATTTGTTGATGAATGATGGTGGCATTGAAGTTCTGAAAGAAGAAATTGAAACTAAGTTTATTAGGCCTTGTCCTCCTCATGTTCCAATGTTTGGTTCTTTCAAAAGGTTACAAGAAGTTGATGCATGGTATAATGATGGATGGTGGGAAGGCATGGTTGTTGAATTGGTGAATAGCGAAGAGTGTTACGTTCGTTTTAGGAACAATGAAGTATTAAAATTTGAATCTTCGAAGTTAAGGCCGCATCAGGATTGGATTGATGGAAAATGGATTATGTCTTCCAAGGAGTCAAGTGAGCGAGTGAAGAAATTTGGAGATGTGATCCATGAAACCGAAAATCTAGGTGGAACAAAATTAATTTTGAAAGGTCCAATTCCTAGTGAGAGTGCAAAGCATAATAGAGATATGATAAGTACTGTACATAATGGAAGCAAATTTGATTTACATTTCTATAAAGGGACAAATGTAGAAGTTAAAAGTGATGAACAAGGCTATGAAGGTTCATGGTATCCTGCAACTGTTGTTGATTTATATCAAAATGGAAAGTACTTGGTGGAGTATTCAACCTTGAAAACAGATGACTTAACTCAACAGCTGAAAGAAGTGGTAGATGTTTCGGATATCAGACCGCGTCCACCAGATATCGATCATTTTTGTCGATATGTGAGGCAGGAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGAAGGTGTAGTATCTAATGTTGGTCATGGTTTAAATGGATTCAAGTATCAGGTTTACTTTTGGACTTCAAATGAGGTGCTGGAATTTGAACATAATCATCTGAGGCCTCATCAATATTGGATTGATGGAAGATGGGTGCTTGCTTCTTTGGGTTGA 1191 0.3762 MHSTQRRPNKQLKEKEDYIDVVGDAVHACWVPPLLQPQLILQDKPPQEIKKEPKVKIKFKFTGKPKNEPKFRKGEIVEVSSDEEGYQGAWFVATIIDTLGNEKFLVEHRDLLMNDGGIEVLKEEIETKFIRPCPPHVPMFGSFKRLQEVDAWYNDGWWEGMVVELVNSEECYVRFRNNEVLKFESSKLRPHQDWIDGKWIMSSKESSERVKKFGDVIHETENLGGTKLILKGPIPSESAKHNRDMISTVHNGSKFDLHFYKGTNVEVKSDEQGYEGSWYPATVVDLYQNGKYLVEYSTLKTDDLTQQLKEVVDVSDIRPRPPDIDHFCRYVRQEWVDAWYNDGWWEGVVSNVGHGLNGFKYQVYFWTSNEVLEFEHNHLRPHQYWIDGRWVLASLG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1174 396 CDD TUDOR 276 319 IPR002999 -
Mtr2g1174 396 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 26 394 - -
Mtr2g1174 396 Gene3D - 250 326 - -
Mtr2g1174 396 SMART agenet_At_2 328 387 IPR014002 -
Mtr2g1174 396 SMART agenet_At_2 257 325 IPR014002 -
Mtr2g1174 396 SMART agenet_At_2 69 138 IPR014002 -
Mtr2g1174 396 SMART agenet_At_2 141 196 IPR014002 -
Mtr2g1174 396 Pfam Agenet domain 74 135 IPR008395 -
Mtr2g1174 396 Pfam Agenet domain 262 322 IPR008395 -
Mtr2g1174 396 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 26 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1174 Mtr-Chr2 12755123 12757711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1174 268 385 PHD Transcription Factor Family AT5G58610 30.657 6.75e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1174 - - mtr:MTR_2g033390 793.882