Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1166 ATGGTGTTGGAAACTGAAATCATTTATCAACAAAGCGTGTTGGATGTTAAGTATCATCTCTGCGTTTCTTCTGAATCTGTTTCAACTGAAACCTCTCTCTTTGAATCGACTGTGAGTTGCTCAGAGGTGATTAAAGAATCTATTATAGAGGATGCTGTTGCAATGTTTACCCCAAAGGTTCGTTCTGGTAGCTGTGCTGATATTGGTCCGAGGGGATCAATGGATGATGAACACATTCAAATAGATGATCTAGCTGCCCACCTTGGATTTGTGTTGAAATACCCTACACCGAGTTCTTTTTATGCTGTTTTTGATGGACATGGAGGTCCTGATGCAGCTGTGTTTGTTAAGAACAATGCTATGAAATTATTTTTTGAAGATACTACTATGCTGGAAACTTATGACTCTGATGCACTTCTGCTGAAGAGGTTGGAAGATTCTCATCGGAAAGCTTTTCTAGGTGCTGACCTTTTATTGGCCGATGAGCAGAGTATTAGCAGTTCATGTGGGACAACAGCACTGACTGCCCTTATACTTGGAAGGCATTTGCTGGTTGCTAATGCTGGTGATTGTCGAGCAGTTCTTTGTAAGCGTGGAGTAGCTGTTGACATGTCTCAAGACCATAGACCAAGTTATTTACCAGAACGTAAAAGAGTTGAAGAGTTGGGTGGTTATATTGATGATGGATATCTCAATGGTTATCTTTCTGTCACTCGTGCCCTTGGCGATTGGGACTTAAAATTACCACTTGGTTCTGCCTCACCTCTGACCGCCGAGCCCGATGTTCAGGTGGTCACATTGACTGAGGAAGATGAGTTCTTGATCATTGGGTGTGATGGCATCTGGGATGTAATGTCAAGCCAGGATGCAGTTAGTCTTGTCCGTCGTGGATTAAGAAGGCACGATGACCCACAGCAAAGTGCCAGAGAGCTTGTCAAAGAAGCACTGCGCCTACACACAACAGATAATCTTACTGTAATTGTCATTTGCTTGTCTGCTGTCGAAAGCATTGTTGAATCGTGTCCACCCCATAGGCGAAGATTTAGAGCTTGCTCTATGTCAGAAGAGGCTAGAAACAAATTGAGGAGCTTGCTAGAAAGTAACTGA 1107 0.4309 MVLETEIIYQQSVLDVKYHLCVSSESVSTETSLFESTVSCSEVIKESIIEDAVAMFTPKVRSGSCADIGPRGSMDDEHIQIDDLAAHLGFVLKYPTPSSFYAVFDGHGGPDAAVFVKNNAMKLFFEDTTMLETYDSDALLLKRLEDSHRKAFLGADLLLADEQSISSSCGTTALTALILGRHLLVANAGDCRAVLCKRGVAVDMSQDHRPSYLPERKRVEELGGYIDDGYLNGYLSVTRALGDWDLKLPLGSASPLTAEPDVQVVTLTEEDEFLIIGCDGIWDVMSSQDAVSLVRRGLRRHDDPQQSARELVKEALRLHTTDNLTVIVICLSAVESIVESCPPHRRRFRACSMSEEARNKLRSLLESN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1166 368 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 355 - -
Mtr2g1166 368 Gene3D - 46 336 IPR036457 -
Mtr2g1166 368 SUPERFAMILY PP2C-like 54 332 IPR036457 -
Mtr2g1166 368 Pfam Protein phosphatase 2C 69 323 IPR001932 -
Mtr2g1166 368 PANTHER PROTEIN PHOSPHATASE 2C 1 355 IPR015655 GO:0004722|GO:0006470
Mtr2g1166 368 SMART PP2C_4 51 329 IPR001932 -
Mtr2g1166 368 CDD PP2Cc 60 331 IPR001932 -
Mtr2g1166 368 ProSiteProfiles PPM-type phosphatase domain profile. 61 331 IPR001932 -
Mtr2g1166 368 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
Mtr2g1166 368 SMART PP2C_SIG_2 76 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1166 Mtr-Chr2 12514499 12516939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1166 1 365 PP2C-type Phosphatase Gene Family AT1G48040 56.736 1.44e-142 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1166 K14803 - gmx:100798957 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1166 2 12514499 12516939 Mtr2g1166 2 12514499 12516939 ECH
Mtr4g4497 4 58929198 58931652 Mtr2g1166 2 12514499 12516939 PCT