Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1158 ATGGACACCGAGGCTGCCACCACTCCACAGTTCGCGCTGTCCGATACAGACATCAACTGGGACAGGTTGGATAAGACCAGGTTCCACATCATTGGTGCAGTACTCTTCACGGCTCAATCAGCATTACTTCATCCAACAGCAGTGGTGAAGACAAGGATGCAAGTAGCTGCTTCAGGTCTCTCTAACATGAAGGGAATGTCAGTGTTCACTCACATTTTGAGGAGTGATGGAATTCCTGGAATCTTTAGAGGTTTTGGAACTTCTGCTATTGGATCAATGCCTGGTAGGGTTTTAGCCCTTACATCTCTTGAGATGTCAAAGGACTTTATGTTGAAACACACTCAAGGTAGCGATATTCCAGAAGCATCACGTATTGGCCTTGCAAATGCTGTTGCTGGCATGGTTTCAAACTTGGTTTCTTGTGTTTACTTTGTGCCTTTGGATGTGATTTGCCAAAGGCTAATGGTTCAAGGTCTTCCTGGAACTACATATTGTAAAGGACCATTTGATGTTATCCGAAGAGTAGTGCATGCTGAGGGTGTTCGTGGCTTGTATAGAGGTTTTGGATTAACGGCTGTATCGCAGTCCCCTGCATCTGCACTTTGGTGGGGTTCATATGGGGCAGCACAACACATAATTTGGAGGAGTTTAGGCTACAAAGATGACATGGAGAAGAAGCCTTCGCATGTGGAAATGGTGACAGTTCAAGCTACTGCTGGGATGGTAGCTGGTGCTAGTTCATCTGTTATCACTACTCCCATAGATACTGTAAAAACACGACTTCAGGTTATGGACAACTATGGTTCTGGAAGACCATCAGTATTGAAGACAGCAAGAACTCTCCTTAAGGAAGATGGGTGGTGGGGATTTTACAGAGGGTTTGGACCAAGATTTTTGAATATGTCACTTTATGGAACAACGATGATTGTTACTTATGAACTGATAAAGAGATTATCAGTACAACCAACTCTGAGGTCTTTTGCTTAA 987 0.4397 MDTEAATTPQFALSDTDINWDRLDKTRFHIIGAVLFTAQSALLHPTAVVKTRMQVAASGLSNMKGMSVFTHILRSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKHTQGSDIPEASRIGLANAVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTYCKGPFDVIRRVVHAEGVRGLYRGFGLTAVSQSPASALWWGSYGAAQHIIWRSLGYKDDMEKKPSHVEMVTVQATAGMVAGASSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTARTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPTLRSFA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1158 328 Pfam Mitochondrial carrier protein 235 318 IPR018108 -
Mtr2g1158 328 Pfam Mitochondrial carrier protein 128 214 IPR018108 -
Mtr2g1158 328 Pfam Mitochondrial carrier protein 30 113 IPR018108 -
Mtr2g1158 328 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 2 321 - -
Mtr2g1158 328 Gene3D Mitochondrial carrier domain 19 159 IPR023395 -
Mtr2g1158 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 212 IPR018108 -
Mtr2g1158 328 SUPERFAMILY Mitochondrial carrier 21 314 IPR023395 -
Mtr2g1158 328 PRINTS Mitochondrial carrier protein signature 139 157 IPR002067 GO:0055085
Mtr2g1158 328 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Mtr2g1158 328 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Mtr2g1158 328 PANTHER OS01G0329400 PROTEIN 2 321 - -
Mtr2g1158 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 109 IPR018108 -
Mtr2g1158 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 318 IPR018108 -
Mtr2g1158 328 Gene3D Mitochondrial carrier domain 162 328 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1158 Mtr-Chr2 12355249 12358537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1158 15 318 Chloroplast and Mitochondria Gene Families AT5G15640 49.673 3.83e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1158 K15121 - gmx:112997745 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1158 2 12355249 12358537 Mtr2g1158 2 12355249 12358537 ECH