Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1155 ATGGCAAGAAAATGCGAAGAAGGACGTGCCGTGGGAATAGACCTTGGTACAACGTATTCATGTGTTGCAGTATGGCAGGAACAACACTCTCGTGTTGAAATCATTCACAACGATCAGGGCAACAGAACAACACCTTCTTGTGTTGCTTTCACTGAAGATCAAAGGTTTATTGGTGATGCTGCTAAAAATCAAGCTGCTGCTAACTCTCAAAACACTGTCTTTGATGCTAAGAGATTAATTGGTAGGAAGTTTAGTGATCCTATTGTTCTGGATGATGCATTATTATGGCCGTTCAAGGTCACTGCTGGTGTCAATGACAAACCAATAATTACTGTTAACTACAAAGGCCAGGAGAAGCAGCTATGTGCTGAAGAAGTATCATCTATGGTACTAACAAAGATGCGAGAAATTGCTGAGGCATATTTAGAATCACCGGTAAAGAATGCTGTTGTTACTGTACCTGCTTATTTTAGTGATTCTCAGCGAAAAGCAACGATAGATGCTGGCTCAATTGCTGGTCTCAATGTTATGAGGGTAATGAATGAACCCACTGCTGCAGCTGTTGCATATGGCCTTGAAAAGAGAGCTGATTGTGTTGGAGAAAGAAACATTTTTGTGTTTGATCTTGGTGGTGGCACTTTTGACGTTTCTATCCTAACTATTAAGGATAACATCTTCCAAGTTAAGGCCACTGCTGGAAACACTCACCTTGGAGGAGAGGATTTTGATAATAGAATGGTAAACTACTTTGCACAGGAGTTCAAGAGAAAGAACAAATTGGATATTAGTGCAAGTTCAAAAGCCTTGAGGAGATTGAGAACTGCTTGTGAGAGGGCAAAAAGAATACTTTCGTTTCTTGTTGTTGCAACTATTGAGGTAGATTCTTTATTTCAAGGCATTGATTTTTCTTCATCCATCAATCGGGCAAAGTTTGAGGAATTGAATTTAGATCTTCTTAATGATTGTATAAAGACTGTTGAGAGTTGTATTATGGATGCAAAGATGGACAAGAGTACTATAGATGATTTTGTACTTGTTGGTGGATCTTCTAGGATTCCCAAAGTCCAACAGCTATTACAGGACTTTTTCAACGGGAAGGAATTGTGCAAGAGCATTAACCCTGACGAGGCTGTTGCTTATGGGGCAGCTGTTCAAGCTGCTTTGTTGAGTAAAGATGTTAAGAATGTTCCAAATTTGGTGTTGCAGGATGTTACTCCTTTGTCCATTGGTAGGTCAATAATAGGGGATGTCATGAGTGTGGTGATTCCAAGGAACACTTGCATTCCTGTGAAGAAGACACGAGAATATTTTACAGTTGAAGATAACCAATCCAGTTCCTTGATTAAGGTTTACGAGGGTGAGAGAACAAAAGCCAGTGACAACAATTTGCTTGGTTCTTTTCGTCTTTCTGGTTTTCCCCCAGCTCCTCGTGGTTCCCCCTCTTCAGATGTATGTTTTGCTATTGGTGAAAATGGTATTTTGACAGTTTCTGCTACGAATAGTTCTTCTGGCAATTCAAATGAGATTACAATAACTAATTACAAAGAAAGGTTGTCAAGTGAAGAAATAAACAAATTAATTAAAGAGGCTGAGAATTTTCATATTGAAGACCAGAGATTCCTAAGGAAGGCCAAAGCAGTGAATGCTTTGGATGACTACATTTACAAAATGGGAAATGCTTTAAAGAAAAAGGATATTGATGTGAAGCTCTCTTCACAAGAAATCGAGAAGATCGAATCTGCAATTGCTGTGGCCACAAATTTGCTTGATGAGAAAAACCAGCAGGTTGAAATAGATGTTTTGGAGGATTATCTAAAGGGGATTGAGAGTAGAATGGAACAGATTATAGCCAAGACTAATTAG 1863 0.3902 MARKCEEGRAVGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNRTTPSCVAFTEDQRFIGDAAKNQAAANSQNTVFDAKRLIGRKFSDPIVLDDALLWPFKVTAGVNDKPIITVNYKGQEKQLCAEEVSSMVLTKMREIAEAYLESPVKNAVVTVPAYFSDSQRKATIDAGSIAGLNVMRVMNEPTAAAVAYGLEKRADCVGERNIFVFDLGGGTFDVSILTIKDNIFQVKATAGNTHLGGEDFDNRMVNYFAQEFKRKNKLDISASSKALRRLRTACERAKRILSFLVVATIEVDSLFQGIDFSSSINRAKFEELNLDLLNDCIKTVESCIMDAKMDKSTIDDFVLVGGSSRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAALLSKDVKNVPNLVLQDVTPLSIGRSIIGDVMSVVIPRNTCIPVKKTREYFTVEDNQSSSLIKVYEGERTKASDNNLLGSFRLSGFPPAPRGSPSSDVCFAIGENGILTVSATNSSSGNSNEITITNYKERLSSEEINKLIKEAENFHIEDQRFLRKAKAVNALDDYIYKMGNALKKKDIDVKLSSQEIEKIESAIAVATNLLDEKNQQVEIDVLEDYLKGIESRMEQIIAKTN* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1155 620 SUPERFAMILY Actin-like ATPase domain 10 194 IPR043129 -
Mtr2g1155 620 Gene3D - 11 387 - -
Mtr2g1155 620 Gene3D Actin; Chain A, domain 4 238 321 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 9 22 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 39 51 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 61 69 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 149 169 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 212 222 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 340 356 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 372 392 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 398 417 - -
Mtr2g1155 620 PRINTS 70kDa heat shock protein signature 479 495 - -
Mtr2g1155 620 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
Mtr2g1155 620 PANTHER HEAT SHOCK PROTEIN 70KDA 5 619 IPR013126 GO:0005524|GO:0140662
Mtr2g1155 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 551 IPR029047 -
Mtr2g1155 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Mtr2g1155 620 Gene3D - 74 129 - -
Mtr2g1155 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mtr2g1155 620 Gene3D - 195 369 - -
Mtr2g1155 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 547 IPR029047 -
Mtr2g1155 620 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 619 - -
Mtr2g1155 620 Pfam Hsp70 protein 10 616 IPR013126 GO:0005524|GO:0140662
Mtr2g1155 620 Gene3D - 548 620 IPR029048 -
Mtr2g1155 620 Coils Coil 575 595 - -
Mtr2g1155 620 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 618 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1155 Mtr-Chr2 12328504 12331033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1155 7 618 Calmodulin-binding Proteins AT3G12580 65.579 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1155 K03283 - gmx:102667578 896.345