Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1150 ATGTGTAGTATCTTTGTTTCTTCAACAAGTATGGACAATTACCTAGGTGATTTAACTGACATAATCAGAGGTGGTACTGCTGGAGCATATAGTAGTACAGGAACTTCATCATCATCTGCTGAACCTGCAGTTTCTCATCTTCATGATCATGATAATCAGTGGAATCATCATCATCAACATCATCATCAACATAATCATAATCATCAATTCTCTTCTGATCATCATCATCATCACCCTTTGAGTTTCTCTTCTGTTCTTGAAGACAATAGAGGAGGAACAAACATGAATATGTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTTTACAAGAACTTGATCATATACCTTCTTCTTCTTACTTCAACATCACAAGTACTACTAGTACTACTTCACCTGCTTCTATAATTGATGTTGCTTCTTCTGGTGTTAGTGTTACTACTTCATCATCTTCTTCTGCTTCTGTTTTTGCACTTGATGAGTTGAGATCAATATCAAGACCATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCTAATCCAAAGTTACCTAATTATGAATCTTCTTCAACAATAGCAGCACCTTCTCCAAGACCAATTAAACCTTCTGCTGTTATTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGAGTTCAGATCTCATCTTCCAGGAATACAGGTCTTAAACGAAGGAAGAATCAAGCAAAAAAGGTAGTTTGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAGCCTATTAAAGGTTCACCTTATCCAAGGGGTTATTATAGATGCAGCAGTTCAAAGGGATGTTCAGCTAGGAAACAAGTTGAGAGAAGCAGAACAGATCCAAACATGTTGGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCCTTAGCAGGTTCAACAAGATCTCAACCATCCAAAAACAATACTTCTATAAAGAATTCAGAAACTTCACAGCCACAAAATGACACAACAAAGCCAAAAGAAGAACAAGAGAACAATAATAACAGTGATGGAAATGATTCTCCAGTTGTTAACAATGTGAAGGAAGAGAATATGGAAGATATAGAAAAGCTACAAATTGAGATGGATGAAGGAGAATTCAGTGATGGACTTTCTTATAAGGTGATGGAAAATAGCAAAATTCATGAAGATTTTTTTGCTGAATTAGGTGAAATTGAAACTGATCCATTAAACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATAGGGATCAATCCAAGGGTTTAGATCCATTTCATCTCTTTGACTGGTCAGGTGATAACAACAATACCAACAACTCATTTGAAGAACCAAATAAGAGAAGGCTATGA 1452 0.3574 MCSIFVSSTSMDNYLGDLTDIIRGGTAGAYSSTGTSSSSAEPAVSHLHDHDNQWNHHHQHHHQHNHNHQFSSDHHHHHPLSFSSVLEDNRGGTNMNMFGDPLFSTLRDPFLQELDHIPSSSYFNITSTTSTTSPASIIDVASSGVSVTTSSSSSASVFALDELRSISRPCKNIFSNMIQISPNPKLPNYESSSTIAAPSPRPIKPSAVISTNININAKDSLLDNTGVQISSSRNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTSIKNSETSQPQNDTTKPKEEQENNNNSDGNDSPVVNNVKEENMEDIEKLQIEMDEGEFSDGLSYKVMENSKIHEDFFAELGEIETDPLNLLFNQGFGGNSSNDRDQSKGLDPFHLFDWSGDNNNTNNSFEEPNKRRL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1150 483 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1150 483 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1150 483 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 15 467 - -
Mtr2g1150 483 Pfam WRKY DNA -binding domain 268 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1150 483 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 467 IPR044810 GO:0003700
Mtr2g1150 483 SUPERFAMILY WRKY DNA-binding domain 264 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g1150 483 MobiDBLite consensus disorder prediction 57 73 - -
Mtr2g1150 483 MobiDBLite consensus disorder prediction 283 383 - -
Mtr2g1150 483 MobiDBLite consensus disorder prediction 53 86 - -
Mtr2g1150 483 MobiDBLite consensus disorder prediction 445 483 - -
Mtr2g1150 483 MobiDBLite consensus disorder prediction 310 358 - -
Mtr2g1150 483 Gene3D WRKY domain 240 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1150 Mtr-Chr2 12248484 12252454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1150 1 483 WRKY Transcription Factor Family AT1G30650 40.316 4.84e-87 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g1150 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1150 - - aprc:113852911 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1150 2 12248484 12252454 Mtr2g1150 2 12248484 12252454 ECH