Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1123 ATGATTCTGCAGTTTACAATATTTCATATCATCTTAGCTCTAATATTCCCCATATTTCCTCCATTAACATCAGCACAACAAGAAGATGGAATCATAGCACAGCAAGGTTGTAATTCAACATGCGGAACAATGTCAATTCCTTTTCCATTCGGAATGAAAGAACCTCGTTGTTATGCAGACAAATGGTTTGAAATAGAGTGCAAATTAGACAACAATTCTCAAAATCCAAAACCATATTTGAAGTCTTTAAATCTTGAGGTAAATAATTTTTACCTGGACTTAGGCTTGGTTGAGATTATGAATCCAATTCATCGTCCAAACTGTCGAAAATATAATAACAATAAAACCGTTATTATAAACCTTGGAGGCGGTCCTTTCATATATTCACAGGATTACAACAAATTTCTAGCTGTTGGATGTAACAATCTTGCTTTTATACAATCAAGTGGAAACATGGTTGGTGGTTGTGTATCAATTTGCGATGACAACAACATAAACAGCAATTACTTCAATTTGAGTAGTGATGGTTGTAATGGAAGATATTGTTGTGAAACTTCATTGCCTATGCATCTTTCAGAATATAATGCGACGTTACAAGGTTTAAGGGGACCAAATATTAGTGAGTGTAGCTATGCTTTGATTTTAAGTCGTCGTTGGGTATATTTTGATGGGTTGTCATCATATTTGAGTACTTATTATCTTGAGAATTTTAATAAGTTGGAGGATATGGAGTATGCACCAGCAATGCTTGAGTGGGAAATTTTGAATGATATGTTGATTAATTCTACATTTCAACTTCCTTCAGATTCATATTCAAATTGTTATGATTCCCAAGTTACATCCATAAATAACAGAAACACTGGTCGGCAATGCCAATGCTTCTCGGGTTACTTTGGCAATCCCTACATTGCTGGAGGCTGCACAGAAAGTGAAGTATTCAATAATAAGAACAACCGGTCAAAGAAGTCGGCTATTGTAGGGGTTTCATCAAGTCTCGGATCCATAGGTTTCATGATTGGTCTATGGTTATTACACAAAGATATGAAGAAAAGAATGATAAAGAAACGAAAAGAAAAATTCTTCAAAAGAAATGGTGGTTTGTTGTTAAAACAAAGAATGTCTTCAGGAGAAGTAAATATTGACAGAACTACTCTCTTCACCTTAAAGGATCTAAAGAAAGCCACCGACAACTTCAATAAGAATAGAGTTCTTGGAAAAGGAGGTCAAGGAACAGTTTACAAAGGCATGCTAGTAGACGGTAAAATTGTTGCAGTGAAAAAGTTTAAGGTTGAAGGAAAGGTCGAAGAGTTTATTAACGAGTTTGTTATTCTTTCACAAATCAACAATAGAAATGTGGTCAAGATATTAGGATGTTGTTTGGAGACAGAAATTCCATTGCTTGTTTATGAATTCATTCCTAATGGTGACCTTTTTCAGTATTTGCACGACCAAAATGAAGACATACCAATGACATGGGACATGCGTTTGAGAATTGGTACGGAAATTGCTGGAGCATTATTTTACTTACACTCAATTGCATCTCAACCCATTTATCATAGAGATATCAAATCTACAAATATACTACTTGATGAAAAATATAGGCCAAAATTAGCAGATTTCGGAGTATCAAGAATAATTTCAATTGAAGCTACTCACCTTACCACAGTAGTTCAAGGTACTTTTGGTTACTTAGACCCTGAGTACTTTCATACAAGTCAATTTACTGAGAAAAGTGATGTGTACAGCTTCGGAGTTGTTCTTGCTGAACTTTTAACGGGTAAGAAGCCAATATCTGCAATAGGATCTGGGGAATACCAAAATTTAGCTTCCTATTTTATTCAGTGTATAGAGGAGGATATGTTGTTTGATATTATTGACAAAAGGGTTACGAAAGAAGGGGAGAAAGAACATGTCGTTGCAGTTGCAAATCTTGCGTATAGATGCTTAGAGTTGAACGGAAGAAAACGACCAACAATGAAAGAAGTTACATTAAAATTGGAAGGGATCAGGGGATTGAATAAGAAACTTAGTGCACAGCAAAACCATGAGGAAATTGAGCTTCCTGAAATTGAAGAGCACCAACCTTGGGATGAGTTTTCTACGTCGAGTTCATTGCAAATTGTTGACAGTCAAACATACTCCACAGACTCGGAGGTTATGCATATTATTGAATTAAAATAG 2181 0.353 MILQFTIFHIILALIFPIFPPLTSAQQEDGIIAQQGCNSTCGTMSIPFPFGMKEPRCYADKWFEIECKLDNNSQNPKPYLKSLNLEVNNFYLDLGLVEIMNPIHRPNCRKYNNNKTVIINLGGGPFIYSQDYNKFLAVGCNNLAFIQSSGNMVGGCVSICDDNNINSNYFNLSSDGCNGRYCCETSLPMHLSEYNATLQGLRGPNISECSYALILSRRWVYFDGLSSYLSTYYLENFNKLEDMEYAPAMLEWEILNDMLINSTFQLPSDSYSNCYDSQVTSINNRNTGRQCQCFSGYFGNPYIAGGCTESEVFNNKNNRSKKSAIVGVSSSLGSIGFMIGLWLLHKDMKKRMIKKRKEKFFKRNGGLLLKQRMSSGEVNIDRTTLFTLKDLKKATDNFNKNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVEGKVEEFINEFVILSQINNRNVVKILGCCLETEIPLLVYEFIPNGDLFQYLHDQNEDIPMTWDMRLRIGTEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRPKLADFGVSRIISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGKKPISAIGSGEYQNLASYFIQCIEEDMLFDIIDKRVTKEGEKEHVVAVANLAYRCLELNGRKRPTMKEVTLKLEGIRGLNKKLSAQQNHEEIELPEIEEHQPWDEFSTSSSLQIVDSQTYSTDSEVMHIIELK* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1123 726 Pfam Protein kinase domain 398 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1123 726 ProSiteProfiles Protein kinase domain profile. 398 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1123 726 SUPERFAMILY Protein kinase-like (PK-like) 383 667 IPR011009 -
Mtr2g1123 726 Gene3D Transferase(Phosphotransferase) domain 1 472 693 - -
Mtr2g1123 726 Coils Coil 726 726 - -
Mtr2g1123 726 SMART serkin_6 398 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1123 726 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 724 IPR045274 GO:0007166
Mtr2g1123 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Mtr2g1123 726 Gene3D Phosphorylase Kinase; domain 1 369 471 - -
Mtr2g1123 726 Pfam Wall-associated receptor kinase galacturonan-binding 37 89 IPR025287 GO:0030247
Mtr2g1123 726 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 14 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1123 Mtr-Chr2 11937662 11940772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1123 32 720 Receptor kinase-like Gene Family AT1G16260 43.217 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr2g1123 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1123 - - mtr:MTR_2g031530 1423.3