Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1122 ATGATTCTGCAATTTACAATATTTCATATCATCTTAGCTCTAATATTCCCCATATTTCCTCCATTAACATCAGCACAACAAGAAGATGGAATCATAGCACAACAAGGTTGTAATTCAACATGCGGAACAATGTCAATCCCTTTCCCATTCGGAATGAAAGAACCTCGTTGTTATGCAGACAAGTGGTTCGAAATAGAGTGCAAATTAGACAACAGTTCTCAAAATCCAAAACCATATTTGAAGTCTTTAAATCTTGAGGTAAATAATGTTTACCTAGACTTAGGCATGGTTGAGATTATGAATCCAATTTATCATTCAAACTGTCAACAAAATATTAACAATAAAACCGTTACTATAAACCTTGGAGTTAGTCCTTTTATGTATTCCCAGAGTTACAACAAATTTCTAGCCGTTGGATGTAACAATCTTGCTTTTCTACAATCAAATGGAACAACGGTTGGTGGTTGCGTATCAATTTGCGATGATGGCAACTTTAACAACAACTTCAATTCCAGTAACGACCGTTGCAATGGAAGATATTGTTGTGAAACTTCATTGCCTACGCATCTTTCGGAATATAATGCAACGTTTCAAGGTTTAAGCGAACAAAGTATTGATCAGTGTAGTTATGCTTTGATTTTAAGTGATAATTGGATATCTTTTGATGGGTCATATTTGAGTACTTTTAATGAGTTGGGGAATATGGAGTATGCACCAGCAATGCTTGAGTGGGAAATTTTGGTTAATTCGACATTTCAACTTCCTTCAGATTCATATTGTTATGATTCCAAAGTTACATCTTTAAATAACAGAACCACTGGTCGGAAATGTCAATGCTCCTCGGGTTACACCGGCAATCCCTACATTGTTGGAGGCTGCACAGAAACTGAAGTATTCAATAATAAGAACAACCGATCAAAGAAGTCGGCTATTGTAGGGGTTTCATCAAGTCTCGGATCCATAGGTTTCATGGTTGGTCTATGGTTATTGCACAAAGATATGAAGAAAAGAATGATAAAGAAACGAAAAGAAAAATTCTTCAAAAGAAATGGTGGTTTTTTGTTAAAACAAAGAATGTCTTCAGGAGAAGTAAATATTGACAGAACTACTCTCTTCACCTTAAAGGATCTAAAAAAAGCCACCGACAACTTCAATAAGAATAGAGTTCTTGGAAAAGGAGGTCAAGGAACAGTTTACAAAGGCATGCTAGTAGACGGTAAAATTGTTGCAGTGAAAAAGTTTAAGGTTGAAGGAAAGGTCGAAGAGTTTATTAACGAGTTTGTTATTCTTTCACAAATCAACAATAGAAATGTGGTCAAGATATTAGGATGTTGTTTGGAGACAGAAATTCCATTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTCAGTATTTGCATGCCCAAAACGAGGACATACCAATGACATGGGACATGCGTTTGAGAATTGCAACTGAAATCGCCGGAGCATTATTTTACTTACACTCAATTGCATCTCAACCCATTTATCATAGAGATATCAAATCTACAAATATACTACTTGATGAAAAGTATAGGGCAAAATTAGCAGATTTCGGAACATCAAGAATAATATCAATTGAAGCTACTCACCTTACCACGGTAGTTCAAGGTACTTTTGGTTACTTAGACCCTGAGTACTTTCATACAAGTCAATTTACCGAGAAAAGTGATGTATTTAGCTTCGGAGTAGTTCTTGCTGAACTTTTAACCGGTAAGAAGCCGGTATCCTCTATAGGATCTGGCGAATACCAAAGTTTAGCTTCCTATTTTATTGAGTGTATAGATGAGAATATGTTGTTTGACATTATTGACAAAAGGGTCACAAAAGAAGGGGAGAAAGAACATGTCGTTGCAGTTGCAAATCTTGCGTATAGATGCTTAGAGTTGAATGGAAGAAAACGACCAACTATGAAAGAAGTTACATTAAAATTGGAAGGGATCAGGGGATTGAATAGGAAACTTAGTGCACAGCAAAACCATGAGGAAATTGAGCTTCCTGAAATTGAAGAGCACCGACCTTGGGATGAGTTTTCTACGTCGAGTTCATTGCAAATTGTTGACAGTCAAACATACTCCACAGACTCGGAGGTTATGCATGTTATTGAATTAAAATAG 2139 0.36 MILQFTIFHIILALIFPIFPPLTSAQQEDGIIAQQGCNSTCGTMSIPFPFGMKEPRCYADKWFEIECKLDNSSQNPKPYLKSLNLEVNNVYLDLGMVEIMNPIYHSNCQQNINNKTVTINLGVSPFMYSQSYNKFLAVGCNNLAFLQSNGTTVGGCVSICDDGNFNNNFNSSNDRCNGRYCCETSLPTHLSEYNATFQGLSEQSIDQCSYALILSDNWISFDGSYLSTFNELGNMEYAPAMLEWEILVNSTFQLPSDSYCYDSKVTSLNNRTTGRKCQCSSGYTGNPYIVGGCTETEVFNNKNNRSKKSAIVGVSSSLGSIGFMVGLWLLHKDMKKRMIKKRKEKFFKRNGGFLLKQRMSSGEVNIDRTTLFTLKDLKKATDNFNKNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVEGKVEEFINEFVILSQINNRNVVKILGCCLETEIPLLVYEFIPNGNLFQYLHAQNEDIPMTWDMRLRIATEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKLADFGTSRIISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVFSFGVVLAELLTGKKPVSSIGSGEYQSLASYFIECIDENMLFDIIDKRVTKEGEKEHVVAVANLAYRCLELNGRKRPTMKEVTLKLEGIRGLNRKLSAQQNHEEIELPEIEEHRPWDEFSTSSSLQIVDSQTYSTDSEVMHVIELK* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1122 712 SUPERFAMILY Protein kinase-like (PK-like) 369 653 IPR011009 -
Mtr2g1122 712 Pfam Protein kinase domain 384 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1122 712 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 14 710 - -
Mtr2g1122 712 SMART serkin_6 384 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1122 712 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 710 IPR045274 GO:0007166
Mtr2g1122 712 CDD STKc_IRAK 390 655 - -
Mtr2g1122 712 Gene3D Transferase(Phosphotransferase) domain 1 458 678 - -
Mtr2g1122 712 Gene3D Phosphorylase Kinase; domain 1 355 457 - -
Mtr2g1122 712 ProSiteProfiles Protein kinase domain profile. 384 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1122 712 Pfam Wall-associated receptor kinase galacturonan-binding 37 92 IPR025287 GO:0030247
Mtr2g1122 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1122 Mtr-Chr2 11932905 11935963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1122 32 706 Receptor kinase-like Gene Family AT1G16260 43.875 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr2g1122 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1122 - - mtr:MTR_2g031530 1234.17