Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1094 ATGGATTACTCAATAGGAGGTGGCAGTGAGTCCGGTGAAGAAGTCAATGGTAACTTTCGAGATGATGGAAAAAAACCTTCTCACAAACGTCTTACCTCCGCTCAAACATCCATACTTAAAAATTTCATGAAGGAATGCCACCATCCAGACGAGGCACAACGATGTCAATTGGCTGTGAAAATTGGGCTTGAGCCCAAACAAATCAAGTCTTGGTTTCAGAATAAGAGAGCTATGTTGAAGCATCAACATGAGCGAGAAACAAATGGTACTCTTCGTCGGGAGAATGACAAGATTCGTAACGAGAACCTCAAAATAAAAGAGGAACTGAAAGCCAAAATTTGCTTAGATTGTGGGGGTTCACCATTTCCTATGAAAGACCATCAAAATTTCGTGCAGGAGATGAAGCAAGAAAATGCTCAGCTGAAACAAGAGTGTGAGAAAGTGTCTAGCCTTCTTGCAAGTTACATGGAGAAAAAGATATCACGACCGGAATTTGAGCAAGCTCTTAAGTCTATAAAATCATTTCCAAGAGACTATGAATGCTCAAGTCATATGCAAGGTAATCTAGTTATGTGGGGAGGTGTGCTAGGGCAAACCTCAACACAAAACTATGATGCACAAAAGATAACTATGTCTCAAGTTGTAGATGCTGCAATGGATGAATTGGTTAGGCTTGTGAGAGTTGATGAGCCTTTTTGGGTCAAACCTTCAAATACTCAAGATGGGTACACTCTTCATCGTGAAAATTATGAGCAAGTTTTTCCCAAGAACAATCATTTTAAAGGTGCATATGTGTGCGAAGAATCTTCCAAATATTCAGGATTGGTGAAGATTAGTGGCATAGAGTTGGTTGGCATGTTTCTCGACTTGTACTAA 876 0.4007 MDYSIGGGSESGEEVNGNFRDDGKKPSHKRLTSAQTSILKNFMKECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQECEKVSSLLASYMEKKISRPEFEQALKSIKSFPRDYECSSHMQGNLVMWGGVLGQTSTQNYDAQKITMSQVVDAAMDELVRLVRVDEPFWVKPSNTQDGYTLHRENYEQVFPKNNHFKGAYVCEESSKYSGLVKISGIELVGMFLDLY* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1094 291 Coils Coil 124 158 - -
Mtr2g1094 291 SUPERFAMILY Homeodomain-like 24 88 IPR009057 -
Mtr2g1094 291 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 290 IPR042160 -
Mtr2g1094 291 CDD homeodomain 30 83 IPR001356 GO:0003677
Mtr2g1094 291 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 18 290 - -
Mtr2g1094 291 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Mtr2g1094 291 Coils Coil 88 111 - -
Mtr2g1094 291 Pfam Homeodomain 29 80 IPR001356 GO:0003677
Mtr2g1094 291 MobiDBLite consensus disorder prediction 1 31 - -
Mtr2g1094 291 MobiDBLite consensus disorder prediction 15 29 - -
Mtr2g1094 291 ProSitePatterns 'Homeobox' domain signature. 57 80 IPR017970 GO:0000981|GO:0006355
Mtr2g1094 291 SMART HOX_1 24 86 IPR001356 GO:0003677
Mtr2g1094 291 Gene3D - 23 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1094 Mtr-Chr2 11631489 11634697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1094 22 289 Homeobox Transcription Factor Family AT1G73360 36.770 1.05e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mtr2g1094 Homeodomain 6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1094 K09338 - gmx:100795075 254.218