Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1072 ATGGCTCATATTTGTCAATGTCTGAGTCGATTGTTAACTTTCCGGCGAGATTTTCCGGTCACCATTGCCGGAAACAACCGCAAGACAGGGCAAGAGTTGGTGGAGGAAGTGGTGTCACTAGCTCATGGTCTTCTCCAGCTGGGTGTCACACCAGGTGATGTTGTAGCCATCTCTGCTTACAACAGTGATTTGTATCTGGAATGGTTATTAGCCATTGCATTTGTTGGAGGAATTGCTGCTCCTCTGAATTATCGTTGGAGTTTTGAGGAGGCAAAGTTAGCAATGAAAGCAGTGAAGCCAGTGATGTTAGTGATTGATGAGAGCTGCTATTCATGGTACTTCAAATTCCAACAAAATGATGTTCCATTTTTGAAGTGGCATGTTTTGTTGGATTCCCCTTCTTCAGATTTTACAAACAAGTGGAATGTGTTGACTCCAGGAATACTTAAGAGGCATCATGTAAAACCTCTAGAATTTAACTACTCATGGGCACCTGAAGGAGCTGTCATAATATGCTTCACTTCAGGAACCACTGGAAAACCCAAGGGAGTCACAATAAGCCATGAAGCTTTGATCATACAGTCACTAGCCAAGATTGCCATAGTTGGATATAGTGAGGATGATGTCTATCTTCATACTGCTCCATTATGTCACATTGGTGGTTTGTCATCAGCCATGGCCATGCTTATGGTTGGAGGTTGCCATGTATTCATGCCAAAGTTTGATGCAGAATTAGCTGTTGGGGACATAGAGCGATATAATGTGACATCTCTTATAACAGTTCCTGCAATAATGACCAGTCTTATTTCTATTGTTAGGCGCAAAGAAACCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTCAATGGAGGTGGAAGTCTCTCGTTTGAGCTTATCAAAGACACTCACATATTCTTCCACAAAGCTAAGCTTATTTCAGCTTACGGGATGACAGAAGCATGTTCTTCATTGACATTCCTAACGCTGTATGATCCAATGCAAAAAACCATTAGCCATCCTTTTCAAACATATGGTGAAGAAGAATCCAAGCATCTCATTCACCAACCACAAGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAACTAAAGATATGCAAAGATGGTGACACTGGGAGAATTTTAACTAGAGGGCCACATTTAATGCTCAGGTATTGGGATCAAACCCTCACAAACACATCAAATCAGAGGAGTGAAGTCTGGTTTGATACAGGTGACATTGGATTAATGGATTGTCATGGTAACTTGTGGCTCCTTGGACGTACAAATGGTCGCATCAAGAGTGGCGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACTTGAACATCCAGGGATTGCAAGAGTTGTTATTGTGGGAATACCAGATGCACGTTTCACAGAAATGGTAGCAGCATGTATCCAACCAAGAGAAAATTGGCAATGGTTAGAGCATTCTACTTCAAATGAAGAGTTTCACTTATCTAGAAAGAATCTTCAGCAATACTGTCTGGAAAATAATTTAAGCAGGTTTAAGATACCAAAGATATTCATTGAATGGAGAAAGCCTTTTCCACTCACTACTACAGGAAAAATAAGAAGAGACCAAGTCCGAAAGGAGGTTCTGTCTGAGATACAATCTTTGCATAGTAATCTCTGA 1665 0.4132 MAHICQCLSRLLTFRRDFPVTIAGNNRKTGQELVEEVVSLAHGLLQLGVTPGDVVAISAYNSDLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVKPVMLVIDESCYSWYFKFQQNDVPFLKWHVLLDSPSSDFTNKWNVLTPGILKRHHVKPLEFNYSWAPEGAVIICFTSGTTGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKFDAELAVGDIERYNVTSLITVPAIMTSLISIVRRKETWKGGETVKKILNGGGSLSFELIKDTHIFFHKAKLISAYGMTEACSSLTFLTLYDPMQKTISHPFQTYGEEESKHLIHQPQGVCVGKAAPHVELKICKDGDTGRILTRGPHLMLRYWDQTLTNTSNQRSEVWFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIARVVIVGIPDARFTEMVAACIQPRENWQWLEHSTSNEEFHLSRKNLQQYCLENNLSRFKIPKIFIEWRKPFPLTTTGKIRRDQVRKEVLSEIQSLHSNL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1072 554 PANTHER ACYL-COA SYNTHETASE 3 545 - -
Mtr2g1072 554 Pfam AMP-binding enzyme C-terminal domain 444 533 IPR025110 -
Mtr2g1072 554 CDD AFD_class_I 171 535 - -
Mtr2g1072 554 SUPERFAMILY Acetyl-CoA synthetase-like 4 550 - -
Mtr2g1072 554 Gene3D - 5 429 IPR042099 -
Mtr2g1072 554 Gene3D - 431 547 IPR045851 -
Mtr2g1072 554 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 3 545 - -
Mtr2g1072 554 Pfam AMP-binding enzyme 17 435 IPR000873 -
Mtr2g1072 554 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1072 Mtr-Chr2 11426481 11431388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1072 40 462 Monolignol Biosynthesis Gene Families AT3G21240 30.137 3.17e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1072 K14760 - gmx:100809925 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1072 2 11426481 11431388 Mtr2g1072 2 11426481 11431388 ECH