Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1068 ATGACTTCTTCCACACATGATCCCACAGATAATGAGGCTGATGGACAGCAGCAGTCAGAATCACAGATGCAGCCAATATCTGCAAACGGAATTTCTCACGCCAGTATTGATAATGCTCAGATTGTTCAGTATGCAGCACCTCCACAGCTTGGTACGGGGCATGCCATGGCACCACCACCTGCTTATCCATATCCGGATCCCTACTACAGAAGCATCTTTGCTCCCTATGATGCACAACCTTATCCGCCGCAACCCTACGGTGGACATCCAATGGCCAATCTTCAGTTAATGGGAATTCAGCATGCAGGAGTTCCTTTGCCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAACAGTATCATGGTATTTTAAGACGCAGGCAATCTCGTGCTAAAGCTGAATCAGAAAAGAAAGTTACACGGAATCGGAAGCCATACTTGCATGAATCACGGCATTTGCACGCTCTGAAAAGAGCAAGAGGATGTGGAGGCCGGTTTCTGAATTCAAAGAAAGATGAGAATCAACAAGACGAGGTTGGATCAGCTGACAATTCACATTCCAATATCAATCTCAATTCTGATAGAAATGATCTTGCACAATCTGATAAACAACCTTGA 624 0.4503 MTSSTHDPTDNEADGQQQSESQMQPISANGISHASIDNAQIVQYAAPPQLGTGHAMAPPPAYPYPDPYYRSIFAPYDAQPYPPQPYGGHPMANLQLMGIQHAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESEKKVTRNRKPYLHESRHLHALKRARGCGGRFLNSKKDENQQDEVGSADNSHSNINLNSDRNDLAQSDKQP* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1068 207 MobiDBLite consensus disorder prediction 167 181 - -
Mtr2g1068 207 MobiDBLite consensus disorder prediction 182 201 - -
Mtr2g1068 207 MobiDBLite consensus disorder prediction 1 32 - -
Mtr2g1068 207 SMART cbf3 110 171 IPR001289 GO:0003700|GO:0006355
Mtr2g1068 207 PRINTS CCAAT-binding transcription factor subunit B signature 114 136 IPR001289 GO:0003700|GO:0006355
Mtr2g1068 207 PRINTS CCAAT-binding transcription factor subunit B signature 145 168 IPR001289 GO:0003700|GO:0006355
Mtr2g1068 207 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 189 IPR001289 GO:0003700|GO:0006355
Mtr2g1068 207 ProSiteProfiles NF-YA/HAP2 family profile. 111 171 IPR001289 GO:0003700|GO:0006355
Mtr2g1068 207 ProSitePatterns NF-YA/HAP2 subunit signature. 116 136 IPR018362 GO:0003677|GO:0016602
Mtr2g1068 207 MobiDBLite consensus disorder prediction 165 207 - -
Mtr2g1068 207 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 113 168 IPR001289 GO:0003700|GO:0006355
Mtr2g1068 207 Gene3D - 111 172 - -
Mtr2g1068 207 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1068 Mtr-Chr2 11386813 11394299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1068 1 203 CCAAT-HAP2 Transcription Factor Family AT1G30500 54.146 3.00e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mtr2g1068 CBFB_NFYA 2.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1068 K08064 - gmx:100809036 324.709