Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1066 ATGGCACTTTCTATGCATAAAGAAATGGATGCCGGTAAATATGTGAGGTACACTCCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTCATTAGAGAATGTCCTATCCTTTCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAACCGAAGATGCCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTACAGACAGTGAATAGGAAGTTGTCTGCAATGAACAAGCTCTTAATGGAAGAGAATGACCGTCTGCAGAAGCAAGTTTCTCATCTGGTTTATGAGAATGGATACATGAAGCAACAGATTCATACTGCTTCTGCTGCAACTACCACAGACAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCGTCCTCAAAGGGATGCAAACAACCCAGCTGGTCTTCTCGCCGTGGCTGAGGAGACCCTGGCAGAGTTCCTATCTAAGGCTACTGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGAATCTATTGGTATCGTTGCTGTTTCCCGCAACTCTAGTGGGATAGCGGCGCGAGCCTGTGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCTGAGATTCTTAAAGATAGACTGTCATGGTATCGTGACTGCCGATGCGTTGATGTATTGAGTATTGTTCCCACTGGTGGTGGTGGTACAATAGAGCTTATGTACATGCAGACGTATGCGCCTACAACATTGGCTGCAGCACGAGACTTTTGGACACTGAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCGTTGAATGCTTCTACTGGTGGCCCTACAGGGCCTTCGCCGTCTAATTTTGTGAGAGCTGAAATGCTTCCAAGTGGTTTTCTTATTAGACCATGCGAGGGGGGTGGATCCATTATTCATATTGTTGATCACGTGGATTTAGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCCCTCTATGAATCATCAAAAATCTTAGCTCAGAAATTGACTATTGCTGCATTGCAACACATAAAACAGATAGCACAAGAATCCAGTGGAGAAATTCAGTATGGTGGCGGGCGCCAACCAGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTCGATGATGGTTGGTCGTTGCTGGGAAATGATGGTGTTGAAGATGTAACCATTGCTGTGAACTCGTCTCCAAACAAGTTTTTGGGGTCCAATTATTCATCCATGTTTCCAACATTTGGAGGTGGTGTCTTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAATGGGCTGATTATGGCGTTGATGCGTACTCTGCTACTTGTCTCAAGTCTAGCCCCTATGCGGTTCCATGTCCAAGACCTGGTGGCTTCCCCAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCATGAAGAGTTTCTGGAGGTAGTTCGTATAGAGGGGCATGCATTCTCCCCAGAAGATGTTGCACTGGCACGTGATATGTATCTTTTGCAGCTTTGCAGTGGAATTGATGAAAATTCAGTTGGCGCATGTGCTCAACTTGTGTTTGCGCCTATAGATGAATCCTTTGCAGATGATGCCCTCTTACTGCCTTCTGGTTTTCGAGTTATTCCCTTGGATCCTAAATCAGATGGTCCAACCACGTCAAGAACTTTGGATTTACTTGAAGGATCTAGGAATGCTCGTCCATCTGGTGAAGGTGCTGGTTCAAATGGATACAACCTTAGGTCTGTCCTTACAATTGCATTCCAATTTACCTTTGAGAATCATTTGCGCGACAACGTGGCTTCTATGGCTCGCCAGTATGTGCGTAGCGTTGTGGCATCAGTTCAAAGAGTTGCCATGGCAATTGCGCCCTCTCGGCCAGGTACTCAGCTAGGGCCAAAGTCTCTTCCTGGTTCGCCAGAAGCTCATGCTTTAGCACGATGGATATCTAGAAGCTACAGGATGCACACTGGTGCCGAGCTTTTTAGAGTCGAGTCCGCAGCGAGTGATGCAATACTGAAACAACTTTGGCACCATTCTGATGCAATTATGTGCTGTTCTGTGAAAACAAATGCATCTCCAATATTCACCTTTTCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATTATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCTAAGATTATGCAACAGGGTTATGCATCTCTGCCAGGAGGGATTTGTGTATCAAGCATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTTAATGATGATGATGCCAATCACTGCTTAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA 2511 0.452 MALSMHKEMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAATTTDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPTGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDENSVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPTTSRTLDLLEGSRNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSVKTNASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1066 836 SUPERFAMILY Bet v1-like 161 372 - -
Mtr2g1066 836 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 836 - -
Mtr2g1066 836 Pfam MEKHLA domain 691 835 IPR013978 -
Mtr2g1066 836 Coils Coil 78 102 - -
Mtr2g1066 836 Pfam Homeodomain 13 71 IPR001356 GO:0003677
Mtr2g1066 836 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 836 IPR044830 GO:0003700
Mtr2g1066 836 MobiDBLite consensus disorder prediction 128 152 - -
Mtr2g1066 836 CDD START_ArGLABRA2_like 155 371 - -
Mtr2g1066 836 Gene3D - 194 376 IPR023393 -
Mtr2g1066 836 Gene3D - 6 79 - -
Mtr2g1066 836 Pfam START domain 161 369 IPR002913 GO:0008289
Mtr2g1066 836 SMART START_1 160 370 IPR002913 GO:0008289
Mtr2g1066 836 CDD bZIP 65 104 - -
Mtr2g1066 836 SUPERFAMILY Homeodomain-like 13 75 IPR009057 -
Mtr2g1066 836 SMART HOX_1 10 76 IPR001356 GO:0003677
Mtr2g1066 836 ProSiteProfiles START domain profile. 151 379 IPR002913 GO:0008289
Mtr2g1066 836 MobiDBLite consensus disorder prediction 128 153 - -
Mtr2g1066 836 CDD homeodomain 13 73 IPR001356 GO:0003677
Mtr2g1066 836 ProSiteProfiles 'Homeobox' domain profile. 8 72 IPR001356 GO:0003677
Mtr2g1066 836 SUPERFAMILY Bet v1-like 408 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1066 Mtr-Chr2 11366786 11372113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1066 7 836 Homeobox Transcription Factor Family AT2G34710 78.903 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr2g1066 START 2.5e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1066 K09338 - gmx:100779499 1503.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1066 2 11366786 11372113 Mtr2g1066 2 11366786 11372113 ECH