Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1047 ATGGAGGATTCCGAAGGAGTCCTCAACTTCGATTTCGAGGGCGGTCTCGACGCACAACCTACCGCCGCCACCGCAATCACCTCCACCGCTGCCGTCTCCACCCCGATCGTCCAATCCGATTCCTACTTACCACCTTCCAATGGAGCCGCAGCCGCGGCTCCATCTGTTGCTGAACATACTGCCGGTAATAATCCCGGTCGACGAAGCTTCCGGCAAACGGTGTGTCGTCATTGGCTAAGGAGTTTGTGTATGAAAGGTGAAGCGTGTGGGTTTTTGCATCAGTATGATAAAGCGAGAATGCCTATTTGTCGGTTTTTTAGATTGTATGGAGAATGTCGTGAGCAGGATTGTGTTTATAAGCATACTAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCTAATGGGCCCGATTGTCGGTATAGGCATGCAAAATCTCCTGGACCTCCTCCTCCAATTGAAGACGTTCTTCAAAAGATCCAACATTTATATTCTTACAATTACAACAACTCTCACAAGTTTAGCCAACAAAGGGGTTCTAACTATAATCAACAAGTTGAAAAGTCTCAGTTTCCTCAAGGAATTAATTCTGCAAACCAAGGTGCGGTTGGAAAACCATTAGTTGCAGAGTCAGGAAATGGCCAGCAGCAGCAACCAGTTCAACAGTCTCAGCAGCAAGTCAGCCAGAACCAATCACAAAATCTTGCTAATGGCCAGCCCAATCAAGCCAATCGAACATCAACCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTAAAGAGTTGCAATCGTGAAAACTTGGAGTTGTCTGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCAAAACTAAATGAAGCATTTGACTCTGTGGAAAACGTGATATTGATTTTCTCAGTCAACCGTACTCGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGGGGTTCTGTTGCTGGGGGAAACTGGAAATATGCTCATGGAACGGCACATTATGGACGTAATTTCTCTGTTAAGTGGTTGAAGTTATGTGAACTATCATTCCACAAAACTCGCCATTTGAGAAATCCATACAATGAGAACTTACCGGTGAAGATAAGTAGAGATTGTCAGGAGCTGGAACCCTCTATTGGTGAGCAGTTGGCATCCTTGCTATATACTGAGCCAGATAGTGAACTTATGGCTATCTCAATTGCAGCAGAGTCTAAACGAGAAGAAGAGAAAGCAAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGATATTGTCCCATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAGGAGAGCTTTGGTCAAGCTGTAGGGCCAGCTGTTCAAGGAAGAGGTAGGGGCAGAGGTGGTATGATGTGGCCCCCTCACATGCATCTTGGGCGTGGAGCAAGACCGATCCATGGAATGCAAAATTTTAATCCTATGATGGGCGATGGATTATCCTATGGACCTGCTGGACCCGATGGTTTTGGTATGCCAGATCTTTTTGGCATGGGTCCCCGAGGTTTTGGTCCATATGGTCCTAGGTTTGGTGGTGATTTTGGAGGCCCCCCAGCTGGCATGATGTTTCGAGGTCGACCCTCAAACCCTGGGATGTTTCCCGGGGGTGGATTTGGGATGATGATGAATCCTGGACGCGGTCCTTTTATGGGGGGAATGGGGGTTCCAGGTCCAAACGCACCAAGAGGTGGTAGGCCAGTCAATATGCCTCCGATGTTTCCACCACCTCCACCTCCACCACAAAATATAAACCGCACTGGCAAAAGAGATCAAAGACCAAGTGATCGGAATGATAGGTATGGTTCAGGACCAGAGCAGGGCAAGAGTCAAGACATGCTCAGTCAAAGTGGGGGTCCTGGTGATGACATGCAGCATCAGCAAGGATACAACAAGTCACAGCAGGATGATCGGAATGACGATAGTGAAAGTGAAGATGAGGCACCTAGGCGGTCAAGACACGGAGAGGGAAAAAAAAGAAAAGGCGAATCTTAG 2052 0.4649 MEDSEGVLNFDFEGGLDAQPTAATAITSTAAVSTPIVQSDSYLPPSNGAAAAAPSVAEHTAGNNPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEDVLQKIQHLYSYNYNNSHKFSQQRGSNYNQQVEKSQFPQGINSANQGAVGKPLVAESGNGQQQQPVQQSQQQVSQNQSQNLANGQPNQANRTSTPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYTEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGQAVGPAVQGRGRGRGGMMWPPHMHLGRGARPIHGMQNFNPMMGDGLSYGPAGPDGFGMPDLFGMGPRGFGPYGPRFGGDFGGPPAGMMFRGRPSNPGMFPGGGFGMMMNPGRGPFMGGMGVPGPNAPRGGRPVNMPPMFPPPPPPPQNINRTGKRDQRPSDRNDRYGSGPEQGKSQDMLSQSGGPGDDMQHQQGYNKSQQDDRNDDSESEDEAPRRSRHGEGKKRKGES* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1047 683 MobiDBLite consensus disorder prediction 411 472 - -
Mtr2g1047 683 ProSiteProfiles YTH domain profile. 259 394 IPR007275 GO:0003723
Mtr2g1047 683 MobiDBLite consensus disorder prediction 623 651 - -
Mtr2g1047 683 ProSiteProfiles Zinc finger C3H1-type profile. 69 96 IPR000571 GO:0046872
Mtr2g1047 683 MobiDBLite consensus disorder prediction 608 622 - -
Mtr2g1047 683 Pfam YT521-B-like domain 259 321 IPR007275 GO:0003723
Mtr2g1047 683 Pfam YT521-B-like domain 338 393 IPR007275 GO:0003723
Mtr2g1047 683 MobiDBLite consensus disorder prediction 209 254 - -
Mtr2g1047 683 MobiDBLite consensus disorder prediction 652 683 - -
Mtr2g1047 683 MobiDBLite consensus disorder prediction 583 603 - -
Mtr2g1047 683 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 680 IPR045168 -
Mtr2g1047 683 MobiDBLite consensus disorder prediction 214 254 - -
Mtr2g1047 683 Gene3D ph1033 like domains 236 399 - -
Mtr2g1047 683 MobiDBLite consensus disorder prediction 433 452 - -
Mtr2g1047 683 MobiDBLite consensus disorder prediction 572 683 - -
Mtr2g1047 683 Gene3D - 59 127 - -
Mtr2g1047 683 ProSiteProfiles Zinc finger C3H1-type profile. 123 150 IPR000571 GO:0046872
Mtr2g1047 683 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 1 680 - -
Mtr2g1047 683 SUPERFAMILY CCCH zinc finger 71 94 IPR036855 GO:0046872
Mtr2g1047 683 SMART c3hfinal6 125 149 IPR000571 GO:0046872
Mtr2g1047 683 SMART c3hfinal6 97 123 IPR000571 GO:0046872
Mtr2g1047 683 SMART c3hfinal6 69 95 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr2g1047 YTH 3.6e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1047 K14404 - gmx:100802826 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1047 2 11150183 11160657 Mtr2g1047 2 11150183 11160657 ECH