Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1029 ATGGAGATTTTCAAATTCTTCTACTTCATTAATCTCCTCTCTACTTTCATCTTATCATCATCGTCATCTTTAGCAATTGATCCTTATTCACAAGCACTACTAAGTCTAAAATCTGAGCTTATAGACAATGATAATAGCCTGCATGACTGGGTGGTCCCCTCTGGAGGGAACTTAGCTAAAAGTGGAAGTTCCTATGCATGTTCTTGGTCAGGCATCAAGTGTAACAAGGACTCAAATGTAACTTCCATAGACCTTTCCATGAAGAAACTAGGTGGTGTACTATCAGGTCAATTACCTGCTGAATTTTCAGAATTGGAAAATCTTAAGATTCTCAACCTATATGGAAATTCCTTCAGTGGAAGCATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTCTCTTCTTCTAGCTGCTAATTCTCTCACAGGAAGTATACCACCAGAACTTGGTAACCTCAAAACAGTGACTAGCATGGAAATTGGCTCCAATTCTTACCAGGGTTTCATTCCACCTCAACTAGGTAATATGAGTCAGCTTCAGAATCTTGAGATAGCAGATGCTAATCTATCTGGTTCTATTCCAAAGGAACTTTTCAGTCTCACCAATTTGCAAATACTTTTTCTGTCCATAAACCAGCTAACAGGATCAATACCAAGTGAGTTCAGCAAAATAAAACTTCTCACATTTTTAGATCTCTCTGATAATTTGCTTTCTGGGTCGATTCCTGAAAGCTTTTCAGAGCTAAAAAGCTTAATCATACTTAGTCTTGGGTCGAATGACATGAGTGGCATTGTACCTGAAGGCATTGCAGAACTACCGTCCTTAGAATTTCTTCTCATTTCTCACAATCGCTTCTCTGGATCACTCCCAAAGAGTTTAGGCAAAAACTCCAAACTCAAGTCGGTGGATGTCTCCGTAAACAACTTCAATGGCAGCATACCACCAAGTATTTGTCAAGCTACTCAGTTGAGTTATTTCAGTGTCTCTTATAATATGCAATTAGGAGGAAACATCCCTTCACAAATTTGGTCTATGCCACAACTTCAAAATTTCTCAGCATATTCTTGTGGTATTTTAGGCAATCTTCCTTCATTTGAGTCATGCAAATCAATTTCAACAATTCGTCTTGGTAGAAACAACTTATCTGGAACAATACCAAAAAGTGTTTCGAAATGTCAAGCTCTTATGATAATCGAATTATCTGACAATAATTTGACAGGTCAAATACCCGAGGAGCTGGCAGATATCCCTATTCTTGAAAGTGTAGATTTATCTAACAATAAACTCAATGGCCTCATACCTGAAAAGTTTGGAAGTTCATCAAGTTTAAAACTTCTCAACGTGTCTTTCAACAATATCTCAGGTTCAATACCCGAGGAGCTGGCAGATATCCCTATTCTTGAAAGTGTAGATTTATCTAACAATAAGCTCAATGGCCTCATACCTGAAAAGTTTGGAAGTTCATCAAGTATAAAACTTCTCAATGTGTCTTTCAACAATATCTCAGGTTCAATACCAAAAGGAAAGTCATTCAAATTAATGGACACTAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGTTCCATTAAGACCATGTATTAAGTCAGTAGGAATATTAGGGAGCACAAACACTTGGAAGCTTACACATATTCTGTTACTCTCTGTAGGGTTGCTAATAATCCTTATGGTATTGGGCTTTGGAATACTTCATTTCAAAAAGGGGTTTGAGAGTCGATGGAAAATGATTTCATTTGTTGGACTACCACAATTCACACCAAATGATGTCTTGACAAGCTTCAACGTAGTTGCTGCTGAACATACAGAGGTTACAAAAGCAGTTCTTCCAACAGGTATAACAGTTTTAGTCAAGAAGATTGAATGGGAAACAAGGAGCATTAAGTTGGTGTCAGAATTTATAATGAGGCTAGGAAATGCAGCAAGGCACAAGAATTTAATCAGGTTGTTGGGTTTTTGCTACAACCAGCAACTAGTTTACCTTTTGTATGATTACTTGCCAAATGGAAATTTGGCTGAGAAAATTGGAATGGAATGGGATTGGTCAGGTAAATTCAGAACAATAGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCACATGGAGATTTGAATTCCACCAACGTTGTATTTGATGAAGATATGGAACCTCATTTAGCTGAATTTGGGTTCAAACATGTCATAGAGTTGAGTAAAGGCTCATCTCCTACTACAACTAAGCAGGAAACAGGTTTAATTTTTATGGCAGAATACAATGAATCAATGGAAGAGGAACTCGGCAGCGATGTCTACAATTTTGGGAAGATGATTCTAGAAATTTTAACCGGCAGAAGGTTGACAAGTGCAGCAGCCAACATTCACAGCAAATCACATGAGACTCTTCTAAGAGAAGTTTACAATGACAATGAAGTGACCTCTGCCAGTTCAATGGAAGAGATTAAATTGGTTCTTGAGGTTGCTATGCTTTGCACCAGAAGCAGATCATCGGATCGGCCATCCATGGAAGATGCTCTGAAGCTATTGTCAGTTAAAAACTTCTAA 2583 0.3806 MEIFKFFYFINLLSTFILSSSSSLAIDPYSQALLSLKSELIDNDNSLHDWVVPSGGNLAKSGSSYACSWSGIKCNKDSNVTSIDLSMKKLGGVLSGQLPAEFSELENLKILNLYGNSFSGSIPSEYGSFRSLESLLLAANSLTGSIPPELGNLKTVTSMEIGSNSYQGFIPPQLGNMSQLQNLEIADANLSGSIPKELFSLTNLQILFLSINQLTGSIPSEFSKIKLLTFLDLSDNLLSGSIPESFSELKSLIILSLGSNDMSGIVPEGIAELPSLEFLLISHNRFSGSLPKSLGKNSKLKSVDVSVNNFNGSIPPSICQATQLSYFSVSYNMQLGGNIPSQIWSMPQLQNFSAYSCGILGNLPSFESCKSISTIRLGRNNLSGTIPKSVSKCQALMIIELSDNNLTGQIPEELADIPILESVDLSNNKLNGLIPEKFGSSSSLKLLNVSFNNISGSIPEELADIPILESVDLSNNKLNGLIPEKFGSSSSIKLLNVSFNNISGSIPKGKSFKLMDTSAFVGNSELCGVPLRPCIKSVGILGSTNTWKLTHILLLSVGLLIILMVLGFGILHFKKGFESRWKMISFVGLPQFTPNDVLTSFNVVAAEHTEVTKAVLPTGITVLVKKIEWETRSIKLVSEFIMRLGNAARHKNLIRLLGFCYNQQLVYLLYDYLPNGNLAEKIGMEWDWSGKFRTIVGIARGLCFLHHECYPAIPHGDLNSTNVVFDEDMEPHLAEFGFKHVIELSKGSSPTTTKQETGLIFMAEYNESMEEELGSDVYNFGKMILEILTGRRLTSAAANIHSKSHETLLREVYNDNEVTSASSMEEIKLVLEVAMLCTRSRSSDRPSMEDALKLLSVKNF* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1029 860 Gene3D Ribonuclease Inhibitor 188 298 IPR032675 -
Mtr2g1029 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 96 - -
Mtr2g1029 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 94 321 - -
Mtr2g1029 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 454 857 - -
Mtr2g1029 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 320 460 - -
Mtr2g1029 860 PANTHER UNNAMED PRODUCT 320 460 - -
Mtr2g1029 860 PANTHER UNNAMED PRODUCT 5 96 - -
Mtr2g1029 860 PANTHER UNNAMED PRODUCT 94 321 - -
Mtr2g1029 860 PANTHER UNNAMED PRODUCT 454 857 - -
Mtr2g1029 860 Gene3D Phosphorylase Kinase; domain 1 598 670 - -
Mtr2g1029 860 SUPERFAMILY Protein kinase-like (PK-like) 610 856 IPR011009 -
Mtr2g1029 860 Pfam Leucine rich repeat 179 238 IPR001611 GO:0005515
Mtr2g1029 860 Pfam Leucine rich repeat 243 286 IPR001611 GO:0005515
Mtr2g1029 860 Pfam Leucine rich repeat 420 478 IPR001611 GO:0005515
Mtr2g1029 860 Pfam Protein tyrosine and serine/threonine kinase 609 853 IPR001245 GO:0004672|GO:0006468
Mtr2g1029 860 Gene3D Transferase(Phosphotransferase) domain 1 671 859 - -
Mtr2g1029 860 SUPERFAMILY L domain-like 66 220 - -
Mtr2g1029 860 SMART LRR_typ_2 465 488 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 417 440 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 129 153 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 273 297 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 105 128 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 201 224 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 225 248 IPR003591 -
Mtr2g1029 860 SMART LRR_typ_2 249 272 IPR003591 -
Mtr2g1029 860 Gene3D Ribonuclease Inhibitor 299 535 IPR032675 -
Mtr2g1029 860 SUPERFAMILY RNI-like 170 509 - -
Mtr2g1029 860 ProSiteProfiles Protein kinase domain profile. 581 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1029 860 PRINTS Leucine-rich repeat signature 420 433 - -
Mtr2g1029 860 PRINTS Leucine-rich repeat signature 465 478 - -
Mtr2g1029 860 Gene3D Ribonuclease Inhibitor 27 187 IPR032675 -
Mtr2g1029 860 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1029 Mtr-Chr2 10867455 10871575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1029 94 856 Receptor kinase-like Gene Family AT5G65700 32.518 3.72e-134 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr2g1029 PK_Tyr_Ser-Thr 2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1029 - - mtr:MTR_2g029010 1458.35